New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1838343	58 (0.910)	5 (0.080)	5/234	NT	9.3%	coding (228/414 nt)	PP_1643	membrane protein
	?	NC_002947	= 1838362	44 (0.750)					coding (209/414 nt)	PP_1643	membrane protein

ATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1838187‑1838343 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcatgcTGAAAGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTCGTGGTGAATATCTATTTCATCAAGGGCGTGCTGGCGGCGTTCGACCCGGCGCGGGCGGTATTCGGCTGGCTTGAAGTGCTGGTGAGCCTGGGGCTGTTCATTGCCGGGC  <  NC_002947/1838362‑1838216                                                                                                                                                                                                                                                                                                                  ATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTC                                                                                                                                                              <  5:368751/148‑1    CTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGG                                                                                                                                                          >  3:159270/1‑149     TGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCTGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGG                                                                                                                                                          >  1:288169/1‑148     TGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGG                                                                                                                                                          >  1:242622/1‑148       GAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCAT                                                                                                                                                       <  8:296186/149‑1                                    CAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCTGAAAGGCAGCGCCCGGGCGCATGCCT                                                                                                                          <  2:242622/149‑1                                            AGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCAT                                                                                                                                                       <  1:260573/112‑1                                            AGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCAT                                                                                                                                                       >  2:260573/1‑112                                                                                               TCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCTGAAAGGCAGCGCCCGGGCGC                                                                                                                                >  5:188655/1‑84                                                                                               TCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCTGAAAGGCAGCGCCCGGGCGC                                                                                                                                <  6:188655/84‑1                                                                                                                                   TTCACCACGAAGCAGGTCCAGGCATGCTGAATGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTCGTGGT                                                                                                          <  4:37798/70‑1                                                                                                                                   TTCACCACGAAGCAGGTCCAGGCATGCTGAAAGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTGGTGGT                                                                                                          >  3:37798/1‑70                                                                                                                                                     CAGGCATGCTGAAAGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTCGTGGTGAATATCTATTTCATCAAGGGCGTGCTGGCGGCGTTCGACCCGGCGCGGGCGGTATTCGGCTGGCTTGAAGTGCTGGTGAGCCTGGGGCTGTTCATT         >  7:322453/1‑149                                                                                                                                                        GCATGCTGAAAGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTCGTGGTGAATATCTATTTCATCAAGGGCGTGCTGGCGGCGTTCGACCCGGCGCGGGCGGTATTCGGCTGGCTTGAAGTGCTGGTGAGCCTGCGGCTGTTCATTGCC      >  4:200955/1‑149                                                                                                                                                             CTGAAAGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTCGTGGTGAATATCTATTTCATCAAGGGCGTGCTGGCGGCGTTCGACCCGGCGCGGGCGGTATTCGGCTGGCTTGAAGTGCTGGTGAGCCTGGGGCTGTTCATTGCCGGGC  <  7:179377/148‑1                                                                                                                                                                                                                                                                                                                  ATGCTGGAACTTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1838187‑1838343 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcatgcTGAAAGGCAGCGCCCGGGCGCATGCCTGGACCTGCTTCGTGGTGAATATCTATTTCATCAAGGGCGTGCTGGCGGCGTTCGACCCGGCGCGGGCGGTATTCGGCTGGCTTGAAGTGCTGGTGAGCCTGGGGCTGTTCATTGCCGGGC  <  NC_002947/1838362‑1838216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.