New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1838343	58 (0.910)	5 (0.080)	5/234	NT	9.3%	coding (228/414 nt)	PP_1643	membrane protein
	?	NC_002947	= 1838362	44 (0.750)					coding (209/414 nt)	PP_1643	membrane protein

TTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCAT  >  NC_002947/1838197‑1838490                                                                                                                                                   |                                                                                                                                                    ttCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATgcgc                                                                                                                                                   >  2:404643/1‑149 (MQ=255) ttCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATgcgc                                                                                                                                                   >  8:314566/1‑149 (MQ=255) ttCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATgcgc                                                                                                                                                   >  4:277835/1‑149 (MQ=255)          aCGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCt                                                                                                                                          >  7:161853/1‑149 (MQ=255)           cGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTg                                                                                                                                         <  5:384721/149‑1 (MQ=255)            gTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGc                                                                                                                                        >  5:327161/1‑149 (MQ=255)            gTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGc                                                                                                                                        <  4:159270/149‑1 (MQ=255)              aCAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCCCCACGAAGAACGTCCAGCCATGCGCCCGGGCGCTGccg                                                                                                                                      >  1:349117/1‑148 (MQ=255)              aCAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCCGTGCCt                                                                                                                                      >  7:189112/1‑149 (MQ=255)                aGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCttt                                                                                                                                    >  3:200955/1‑149 (MQ=255)                 gTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTc                                                                                                                                   <  6:327161/149‑1 (MQ=255)                 gTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCACGCATGCGCCCGGGCGCTGCCTTTc                                                                                                                                   <  1:207309/149‑1 (MQ=255)                  tAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCa                                                                                                                                  <  7:314566/149‑1 (MQ=255)                  tAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCa                                                                                                                                  <  5:151051/149‑1 (MQ=255)                    gCCCGTCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCGAGCACGCCGTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCa                                                                                                                                  <  8:179377/147‑1 (MQ=255)                    gCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAg                                                                                                                                 <  7:179377‑M2/148‑2 (MQ=255)                        ggCAATGAACAGCCGCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAgcatgc                                                                                                                            >  4:200955‑M2/1‑143 (MQ=255)                          cAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCtgaaaggcagcgcccgggcgcatgcct                                                                                                                          <  2:242622‑M1/149‑28 (MQ=255)                           aaTGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAgcatgcctg                                                                                                                         >  7:322453‑M2/1‑140 (MQ=255)                             tGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGgc                                                                                                                       <  3:128642/149‑1 (MQ=255)                                 cAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGgcaaca                                                                                                                   <  2:288169/149‑1 (MQ=255)                                 cAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGgcaa                                                                                                                     >  4:62857/1‑147 (MQ=255)                                   gCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAATGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGgcaacagc                                                                                                                 <  8:150956/149‑1 (MQ=255)                                    ccccAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGgcaacagc                                                                                                                 >  2:101067/1‑148 (MQ=255)                                      ccATGCTGACCACGAATTCAAGGCATCCGAATTCCCGCCGGGCCGGGGCGTACGGCGGCATCACGGCCTTTATGTAATATTATTTCCCCATGTATGCTGTTCATGGATGCGGCCGGGCGCTGCCTTTCAGCATGCCTGgcaacagcaac                                                                                                              <  8:189112/149‑1 (MQ=255)                                           cTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAAcagcaacagcaa                                                                                                         <  3:277835/149‑1 (MQ=255)                                              aCCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACagcaacagcaac                                                                                                        <  1:101067/147‑1 (MQ=255)                                                cAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTc                                                                                                                                   <  5:69637/118‑1 (MQ=255)                                                cAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTc                                                                                                                                   >  6:69637/1‑118 (MQ=255)                                                cAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCAGGCAACAGCAACAGCAACGGCa                                                                                                    >  4:359332/1‑149 (MQ=255)                                                  gCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCAc                                                                                                   >  1:357057/1‑148 (MQ=255)                                                     cTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGc                                                                                               <  5:100998/149‑1 (MQ=255)                                                      ttCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCt                                                                                              >  6:63645/1‑149 (MQ=255)                                                        cAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTc                                                                                             >  7:127833/1‑148 (MQ=255)                                                           gccagccGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATc                                                                                         <  8:161853/149‑1 (MQ=255)                                                               gccGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCa                                                                                     <  1:246470/149‑1 (MQ=255)                                                                     tACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCa                                                                               >  6:79404/1‑149 (MQ=255)                                                                          cccgcGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTc                                                                           >  3:67954/1‑148 (MQ=255)                                                                               gcCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCt                                                                     <  1:404643/149‑1 (MQ=255)                                                                                     tCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCtgaaaggcagcgcccgggcgc                                                                                                                                <  6:188655‑M1/84‑22 (MQ=255)                                                                                     tCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCtgaaaggcagcgcccgggcgc                                                                                                                                >  5:188655‑M1/1‑63 (MQ=255)                                                                                              gccAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGtt                                                      >  7:199468/1‑149 (MQ=255)                                                                                              gccAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGtt                                                      <  2:357057/149‑1 (MQ=255)                                                                                                 aGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGc                                                   <  8:199468/149‑1 (MQ=255)                                                                                                    aCGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGc                                                                                       >  1:184884/1‑110 (MQ=255)                                                                                                    aCGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGc                                                                                       <  2:184884/110‑1 (MQ=255)                                                                                                     cGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAAc                                               >  6:283413/1‑149 (MQ=255)                                                                                                        ccTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACca                                             >  8:122339/1‑148 (MQ=255)                                                                                                        ccTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACca                                             >  8:41108/1‑148 (MQ=255)                                                                                                              tgaAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGgttg                                      <  3:359332/149‑1 (MQ=255)                                                                                                                aaaTAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGgttgtt                                    >  8:292255/1‑149 (MQ=255)                                                                                                                   tAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcac                                 <  7:292255/149‑1 (MQ=255)                                                                                                                         ttCACCACGAAGCAGGTCCAGGCATGCtgaatggcagcgcccgggcgcatgcctggacctgcttcgtggt                                                                                                          <  4:37798‑M1/70‑44 (MQ=255)                                                                                                                         ttCACCACGAAGCAGGTCCAGGCATGCtgaaaggcagcgcccgggcgcatgcctggacctgcttggtggt                                                                                                          >  3:37798‑M1/1‑27 (MQ=255)                                                                                                                            accaccAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAgcatgcctggacctgcttcgtggtgaa                                                                                                       >  3:37798‑M2/1‑43 (MQ=255)                                                                                                                            accacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGTAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACcagcag                        >  2:26812/1‑149 (MQ=255)                                                                                                                            accacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCATTCAgcatgcctggacctgcttcgtggtgaa                                                                                                       <  4:37798‑M2/70‑28 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcaccac                              >  6:306578/1‑141 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcaccac                              >  6:300851/1‑141 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcaccac                              <  5:306578/141‑1 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcaccac                              <  5:300851/141‑1 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACcagcag                        <  8:378243/147‑1 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACcagcag                        >  7:378243/1‑147 (MQ=255)                                                                                                                              cacGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAACTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAggg                      >  6:352058/1‑149 (MQ=255)                                                                                                                                     cAGGTCCAGGCATCCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGTAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAg               <  1:26812/149‑1 (MQ=255)                                                                                                                                      aGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAgg              <  5:63645/149‑1 (MQ=255)                                                                                                                                        gTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCTACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGaa                                                <  8:123359/113‑1 (MQ=255)                                                                                                                                           cAGGCATGCtgaaaggcagcgcccgggcgcatgcctggacctgcttcgtggtgaatatctatttcatcaagggcgtgctggcggcgttcgacccggcgcgggcggtattcggctggcttgaagtgctggtgagcctggggctgttcatt         >  7:322453‑M1/1‑9 (MQ=255)                                                                                                                                            aGGCATGCGCCCGGGCGCTGCCTTTCAgcatgcctggacctgcttcgtggtgaatatctatttcatcaagggcgtgctggcggcgttcgacccggcgcgggcggtattcggctggcttgaagtgctggtgagcctggggctgttcattg        <  2:242622‑M2/149‑123 (MQ=255)                                                                                                                                            aGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCgaag        <  5:79404/149‑1 (MQ=255)                                                                                                                                             ggCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcacca                               <  2:403595/125‑1 (MQ=255)                                                                                                                                             ggCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTcacca                               >  1:403595/1‑125 (MQ=255)                                                                                                                                              gCATGCtgaaaggcagcgcccgggcgcatgcctggacctgcttcgtggtgaatatctatttcatcaagggcgtgctggcggcgttcgacccggcgcgggcggtattcggctggcttgaagtgctggtgagcctgcggctgttcattgcc      >  4:200955‑M1/1‑6 (MQ=255)                                                                                                                                              gCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCgaagaa      <  5:283413/149‑1 (MQ=255)                                                                                                                                                  gcgcCCGGGCGCTGCCTTTCAgcatgcctggacctgcttcgtggtgaatatctatttcatcaagggcgtgctggcggcgttcga                                                                   >  5:188655‑M2/1‑21 (MQ=255)                                                                                                                                                  gcgcCCGGGCGCTGCCTTTCAgcatgcctggacctgcttcgtggtgaatatctatttcatcaagggcgtgctggcggcgttcga                                                                   <  6:188655‑M2/84‑64 (MQ=255)                                                                                                                                                   ctgaaaggcagcgcccgggcgcatgcctggacctgcttcgtggtgaatatctatttcatcaagggcgtgctggcggcgttcgacccggcgcgggcggtattcggctggcttgaagtgctggtgagcctggggctgttcattgccgggc  <  7:179377‑M1/148‑148 (MQ=255)                                                                                                                                                   cgcCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCAt  <  3:62857/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TTCCAGCGCACGTACAGTAGCCCGGCAATGAACAGCCCCAGGCTCACCAGCACTTCAAGCCAGCCGAATACCGCCCGCGCCGGGTCGAACGCCGCCAGCACGCCCTTGATGAAATAGATATTCACCACGAAGCAGGTCCAGGCATGCGCCCGGGCGCTGCCTTTCAGCATGCCTGGCAACAGCAACAGCAACGGCACCAGCTCGATCGCCAGGATCACCTCGACCCTGGCCCCATGCAGGTTGGCGAACCACAGGTTGTTCACCACCAGCAGGGCGATCAGGCCGAAGAAGCAT  >  NC_002947/1838197‑1838490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.