| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2957557 = | 48 (0.750) | 3 (0.050) | 3/236 | NT | 6.1% | coding (317/1494 nt) | PP_2589 | aldehyde dehydrogenase family protein |
| ? | NC_002947 | 2957615 = | 48 (0.810) | coding (375/1494 nt) | PP_2589 | aldehyde dehydrogenase family protein | |||||
GCCGAGGGCTTCGCGGGTGATGGTGGCCAGCGCATTGGCAGCAGTGGGCGCCACCTGGTCATACAGCTTGTCCAGCGCCTCGCCGTACCAGGCGAACACATGGGCAGAACCCGGCACGTCGATGTTGTAGGCATCCATCACCGGTTTGCCCATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957711‑2957557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccatgtGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGCCCTCGGCGTGGTCGCTGCCGTGGTGCCATGGAACTTCCCGCTCGATATGGCCGCCTG > NC_002947/2957615‑2957761 GCCGAGGGCTTCGCGGGTGATGGTGGCCAGCGCATTGGCAGCAGTGGGCGCCACCTGGTCATACAGCTTGTCCAGCGCCTCGCCGTACCAGGCGAACACATGGGCAGAACCCGGCACGTCGATGTTGTAGGCATCCATCACCGGTTTGC < 8:324085/149‑1 CACATGGGCAGAACCCGGCACGTCGATGTTGTAGGCATCCATCACCGGTTTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCA > 1:218940/1‑121 CACATGGGCAGAACCCGGCACGTCGATGTTGTAGGCATCCATCACCGGTTTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCA < 2:218940/121‑1 CATGGGCAGAACCCGGCACGTCGATGTTGTAGGCATCCATCACCGGTTTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGCCC > 5:360822/1‑149 CCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGCCCTCGGCGTGGTCGCTGCCGTGGTGCCATGGAACTTCCCGCTCGATATGGCC > 4:404515/1‑149 CATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACGCGCGAAGCGCTCGGCGTGGTCGCTGCCGTGGTGCCATGGACCTTCCCGCTCGATATGGGCGC > 8:181303/1‑149 ATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGCCCTCGGCGTGGTCGCTGCCGTGGTGCCATGGAACTTCCCGCTCGATATGGCCGCC > 5:274095/1‑149 TGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGCCCTCGGCGTGGTCGCTGCCGTGGTGCCATGGAACTTCCCGCTCGATATGGCCGCCTG > 4:89071/1‑148 GCCGAGGGCTTCGCGGGTGATGGTGGCCAGCGCATTGGCAGCAGTGGGCGCCACCTGGTCATACAGCTTGTCCAGCGCCTCGCCGTACCAGGCGAACACATGGGCAGAACCCGGCACGTCGATGTTGTAGGCATCCATCACCGGTTTGCCCATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957711‑2957557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccatgtGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGCCCTCGGCGTGGTCGCTGCCGTGGTGCCATGGAACTTCCCGCTCGATATGGCCGCCTG > NC_002947/2957615‑2957761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |