New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2957557 = | 48 (0.750) | 3 (0.050) | 3/236 | NT | 6.1% | coding (317/1494 nt) | PP_2589 | aldehyde dehydrogenase family protein |
? | NC_002947 | 2957615 = | 48 (0.810) | coding (375/1494 nt) | PP_2589 | aldehyde dehydrogenase family protein |
GTCGACCTGGCTGTCGCCAGCGCCCGTCGAGCCTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGC > NC_002947/2957409‑2957704 | gTCGACCTGGCTGTCGCCAGCGCCCGTCGAGCCTTCGAGCAACGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAACTGCTGCTGCGGCTGGCCGAGCACATCATGGCCCATCGAGAAGAACTTGCATTGCTGGACTCGCTGaa > 4:255071/1‑149 (MQ=255) caggcggccatatcgagcgggaagttccatggcaccacggcagcgaccacgccgagggcttcgcgggtgatggtggccagcgcattggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaaca > 4:89071‑M1/148‑148 (MQ=255) ggcggccatatcgagcgggaagttccatggcaccacggcagcgaccacgccgagggcttcgcgggtgatggtggccagcgcattggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaacACAt > 5:274095‑M1/146‑149 (MQ=255) gcgcccatatcgagcgggaaggtccatggcaccacggcagcgaccacgccgagcgcttcgcgcgtgatggtggccagcgcattggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaacACATg > 8:181303‑M1/145‑149 (MQ=255) ggccatatcgagcgggaagttccatggcaccacggcagcgaccacgccgagggcttcgcgggtgatggtggccagcgcattggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaacACATggg > 4:404515‑M1/143‑149 (MQ=255) gCTGTCGCCAGCGCCCGTCGAGCCTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGc < 6:63761/147‑1 (MQ=255) cgacagCCAGCGCCCGTCGAGCCTTCGAGCAAGGCCCCTGGCCGCACATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAATATGGGCaaa > 8:10031/6‑149 (MQ=255) gcCCGTCGAGCCTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTgatgga > 5:168008/1‑149 (MQ=255) gCCTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTgatgga < 3:130482/140‑1 (MQ=255) gCCTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTgatgga > 4:130482/1‑140 (MQ=255) cTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGTCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCTGTGATGGATGCCTacaaca < 6:151292/149‑1 (MQ=255) cTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTacaaca > 4:94066/1‑149 (MQ=255) ttCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGCCTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACAt > 7:212818/1‑149 (MQ=255) cGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACAt < 3:94066/147‑1 (MQ=255) cccTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGc > 2:180625/1‑128 (MQ=255) cccTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGc < 1:180625/128‑1 (MQ=255) cccTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGt < 8:292997/143‑1 (MQ=255) cccTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGt > 7:292997/1‑143 (MQ=255) cccTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCggg > 8:160122/1‑149 (MQ=255) cTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGtt > 4:174520/1‑149 (MQ=255) ccGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGTCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGc < 6:4898/149‑1 (MQ=255) ccGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTga > 6:149359/1‑115 (MQ=255) ccGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTga < 5:149359/115‑1 (MQ=255) cgcgCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGcc > 2:196483/1‑149 (MQ=255) gggcttcgcgggtgatggtggccagcgcattggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaacACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCAtg > 5:360822‑M1/93‑149 (MQ=255) ggCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATgtgt > 1:125801/1‑149 (MQ=255) gcgcCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGtt < 2:125801/149‑1 (MQ=255) cgcCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTc < 4:354985/149‑1 (MQ=255) gAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTa > 1:387032/1‑149 (MQ=255) cgcAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACgg < 7:160122/149‑1 (MQ=255) gcAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGc > 3:78145/1‑149 (MQ=255) aaaGAAATTTCTGCTGCGGCTGGGCGATCTGATCATGGGCCATCGTGAATAACTTGCATTGCTGGACTAGCTGAACATGGGCTAACCGGTGATGTATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCg < 3:347514/148‑1 (MQ=255) gAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTg > 4:405688/1‑138 (MQ=255) ctgctgcGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGa > 1:104859/1‑149 (MQ=255) ctgcggcGGCTGGCCGAGCTGATCATGGCCCATCGTGACGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTgg < 3:255071/148‑1 (MQ=255) tggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaacACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCAtgtg < 2:218940‑M1/59‑1 (MQ=255) tggcagcagtgggcgccacctggtcatacagcttgtccagcgcctcgccgtaccaggcgaacACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCAtgtg > 1:218940‑M1/63‑121 (MQ=255) cGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGc < 2:387032/148‑1 (MQ=255) ggCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTg > 2:20371/1‑149 (MQ=255) gCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGa > 5:6862/1‑149 (MQ=255) ccGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGAc > 6:249218/1‑149 (MQ=255) aTGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGgcgc < 6:6862/148‑1 (MQ=255) gCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCAc < 1:20371/149‑1 (MQ=255) ccATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCActg < 6:168008/149‑1 (MQ=255) ccATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGACTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCAct > 5:392571/1‑148 (MQ=255) tCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCActgctg < 7:265675/149‑1 (MQ=255) gTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGcc < 1:196483/149‑1 (MQ=255) tGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGcc > 8:192135/1‑148 (MQ=255) aagaaCTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAAt < 2:104859/149‑1 (MQ=255) aaCTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATgcg < 5:249218/149‑1 (MQ=255) aCTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCAACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATgcgc > 1:101579/1‑149 (MQ=255) aTTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTAt > 7:87857/1‑112 (MQ=255) aTTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTAt < 8:87857/112‑1 (MQ=255) aTTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGCTGGCGCCCACTGCTGCCAATGCGCTGGcca > 3:307113/1‑149 (MQ=255) gACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCAc < 3:174520/149‑1 (MQ=255) cTCGCTGAACATGGTCAAACCGGTGAGTGATTCCTACAACATCTAGGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGTACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCAccc < 6:392571/149‑1 (MQ=255) gCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCcgc > 7:107227/1‑148 (MQ=255) cTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTg < 6:133173/108‑1 (MQ=255) cTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTg > 5:133173/1‑108 (MQ=255) tGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGgcg < 3:271597/110‑1 (MQ=255) tGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGgcg > 4:271597/1‑110 (MQ=255) aaCATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGaa < 8:107227/147‑1 (MQ=255) aaCATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGc < 4:78145/149‑1 (MQ=255) | GTCGACCTGGCTGTCGCCAGCGCCCGTCGAGCCTTCGAGCAAGGCCCCTGGCCGCGCATGGCGCCGGGCGAGCGCAAGAAAGTGCTGCTGCGGCTGGCCGAGCTGATCATGGCCCATCGTGAAGAACTGGCATTGCTGGACTCGCTGAACATGGGCAAACCGGTGATGGATGCCTACAACATCGACGTGCCGGGTTCTGCCCATGTGTTCGCCTGGTACGGCGAGGCGCTGGACAAGCTGTATGACCAGGTGGCGCCCACTGCTGCCAATGCGCTGGCCACCATCACCCGCGAAGC > NC_002947/2957409‑2957704 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |