New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3336525 =	46 (0.720)	3 (0.050)	3/242	NT	6.3%	coding (71/843 nt)	yghU	GSH‑dependent disulfide bond oxidoreductase
	?	NC_002947	3336564 =	45 (0.740)					coding (32/843 nt)	yghU	GSH‑dependent disulfide bond oxidoreductase

ATTGCGTCGAACCCGTGGCATAGATGCAGGTCAAGGTTTTCACGTGACCGTTTTCGCGCCTTTGAAGGAGATTCATGCATGAGCAAGCCTGCCTACGTGCCACCCAAAGTCTGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3336673‑3336525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGGGTTCGACGCAA  >  NC_002947/3336564‑3336672                                                                                                                                                                                                                                                                    ATTGCGTCGAACCCGTGGCATAGATGCAGGTCAAGGTTTTCACGTGACCGTTTTCGCGCCTTTGAAGGAGATTCATGCATGAGCAAGCCTGCCTACGTGCCACCCAAAGTCTGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAG                                                                                                               >  5:139460/1‑149  TTGCGTCGAACCCGTGGCATAGATGCAGGTCAAGGTTTTCACGTGACCGTTTTCGCGCCTTTGAAGGAGATTCATGCATGAGCAAGCCTGCCTACGTGCCACCCAAAGTCTGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAG                                                                                                               >  1:223822/1‑148                                                                                                              TCTGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGGGTTCGACGCAA  >  7:220753/1‑149                                                                                                                TGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGGGTTCG        >  5:61346/1‑141                                                                                                                TGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGGGTTCG        <  6:61346/141‑1                                                                                                                                                 GCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGAGTTCGAC      >  3:220283/1‑110                                                                                                                                                 GCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGAGTTCGAC      <  4:220283/110‑1                                                                                                                                                 GCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGC                                                          <  5:152212/58‑1                                                                                                                                                 GCCAGACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGC                                                          >  6:152212/1‑58                                                                                                                                                                                                                                                                    ATTGCGTCGAACCCGTGGCATAGATGCAGGTCAAGGTTTTCACGTGACCGTTTTCGCGCCTTTGAAGGAGATTCATGCATGAGCAAGCCTGCCTACGTGCCACCCAAAGTCTGGCGCAACGACGCAGCCTCCGGCGGCCAGTTCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3336673‑3336525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagACTTTGGGTGGCACGTAGGCAGGCTTGCTCATGCATGAATCTCCTTCAAAGGCGCGAAAACGGTCACGTGAAAACCTTGACCTGCATCTATGCCACGGGTTCGACGCAA  >  NC_002947/3336564‑3336672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.