| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4238005 = | 67 (1.050) | 7 (0.120) | 6/240 | NT | 9.8% | coding (245/1122 nt) | catB | muconate cycloisomerase 1 |
| ? | NC_002947 | 4238048 = | 65 (1.080) | coding (202/1122 nt) | catB | muconate cycloisomerase 1 | |||||
AGACCCTGGTGGTATTGCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4238155‑4238005‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcctTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGGTCTGCTGCTGCATGGTGT > NC_002947/4238048‑4238170 AGACCCTGGTGGTATTGCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGC < 4:107479/149‑1 ACCCTGGTGGTATTGCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCT < 2:77342/149‑1 ATTGCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATT < 1:45979/133‑1 ATTGCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATT > 2:45979/1‑133 GCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGG > 2:71074/1‑132 AGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGGT > 5:123196/1‑149 AGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATCGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGG > 8:299572/1‑148 GGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAG > 1:24264/1‑76 GGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAG < 2:24264/76‑1 GCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGGTCT > 4:269050/1‑149 AACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGGTCTGCT < 7:299572/149‑1 TACCTCGCCCCAGCGTTGATTGGCCTTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGGTCTGCTGCTGCATGGTGT < 3:269050/149‑1 AGACCCTGGTGGTATTGCGACTGCGCTGCAGCGATGGCGTGGAAGGCATCGGTGAAGCCACCACCATCGGTGGCCTGGCGTATGGCTACGAAAGCCCCGAAGGGATCAAGGCCAACATCGACGCGTACCTCGCCCCAGCGTTGATTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4238155‑4238005‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcctTGATCCCTTCGGGGCTTTCGTAGCCATACGCCAGGCCACCGATGGTGGTGGCTTCACCGATGCCTTCCACGCCATCGCTGCAGCGCAGTCGCAATACCACCAGGGTCTGCTGCTGCATGGTGT > NC_002947/4238048‑4238170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |