New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6059076	47 (0.730)	4 (0.070)	4/242	NT	8.4%	coding (116/1404 nt)	PP_5311	signal transduction protein
	?	NC_002947	= 6059088	43 (0.710)					coding (128/1404 nt)	PP_5311	signal transduction protein

TACTTCGCGTTTAAAAGATACAGTGGATACGGACCATGACTGAAGTTGCCCTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6058926‑6059076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcACCCGCGAAGCCGCAGGCAGGTGCGAGTGTTCGACCACCTGGCGGTAGGGCACGCCGAGTTTGTCGAGCAGCAGCCTGATGACGGAGGGGGCGTGTGGGGTTGCGGTGTCCAGGGCAACTTCAGTCATGGTCCGTATCCACTG  <  NC_002947/6059088‑6058946                                                                                                                                                                                                                                                                                                        TACTTCGCGTTTAAAAGATACAGTGGATACGGACCATGACTGAAGTTGCCCTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCT                                                                                                                                                   <  7:249233/149‑1   CTTCGCGTTTAAAAGATTCAGTGGATACGGACCATGACTGAAGTTGCCCTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTG                                                                                                                                                  <  4:388625/148‑1                                   CATGACTGAAGTTGCCCTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGC                                                                                                                                                     >  8:341018/1‑113                                                   CTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTGCACCCGCGAAGCCGCAGGCAGGTGCGA                                                                                                                       <  3:299548/127‑1                                                   CTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTGCACCCGCGAAGCCGCAGGCAGGTGCGA                                                                                                                       >  4:299548/1‑127                                                                           CCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTGCACCCGCGAAGCCGCAGGCAGGTGCGAG                                                                                                                      >  5:404954/1‑104                                                                           CCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTGCACCCGCGAAGCCGCAGGCAGGTGCGAG                                                                                                                      <  6:404954/104‑1                                                                                                                                                   CCTGCACCCGCGAAGCCGCGGGCAGGTGCGAGTGTTCGACCACCTGGCGGTAGGGCACGCCGAGTTTGTCGAGCAGCAGCCTGATGACGGAGGGGGCGTGTGGGGTTGCGGTGTCCAGGGCAACTTCAGTCATGGTCCGTATCCACTG  >  2:177803/1‑148                                                                                                                                                   CCTGCACCCGCGAAGCCGCAGGCAGGTGCGAGTGTTCGACCACCTGGCGGTAGGGCACGCCGAGTTTGTCGAGCAGCAGCCTGATGACGGAGGGGGCGTGTGGGGTTGCGGTGTCCAGGGCAACTTCAGTCATGGTCCGTATCCACTG  >  7:211838/1‑148                                                                                                                                                                                                                                                                                                        TACTTCGCGTTTAAAAGATACAGTGGATACGGACCATGACTGAAGTTGCCCTGGACACCGCAACCCCACACGCCCCCTCCGTCATCAGGCTGCTGCTCGACAAACTCGGCGTGCCCTACCGCCAGGTGGTCGAACACTCGCACCTGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6058926‑6059076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcACCCGCGAAGCCGCAGGCAGGTGCGAGTGTTCGACCACCTGGCGGTAGGGCACGCCGAGTTTGTCGAGCAGCAGCCTGATGACGGAGGGGGCGTGTGGGGTTGCGGTGTCCAGGGCAACTTCAGTCATGGTCCGTATCCACTG  <  NC_002947/6059088‑6058946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.