New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 616501896 (1.500)5 (0.080) 5/248 NT 5.3% coding (265/2013 nt) PP_5405 transposase
?NC_002947 = 6165050 84 (1.340)coding (233/2013 nt) PP_5405 transposase

TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6164871‑6165018
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCTGGAGTATCGGCGAGCTTCAAAGAAAGAAAGCTACGAGCAGAAGGTGGACAAGCGTTTTGCTGCGATATCTGGCTTGGTTGCTCGCCAAAATGAAATCCTCGCGAGC  <  NC_002947/6165050‑6164905
                                                                                                                                                                                                                                                                                                      
TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCT                                                                                                                                                     <  6:101301/147‑1
TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCT                                                                                                                                                     <  6:229911/147‑1
                            ATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGC                                                                                                                        >  5:352781/1‑148
                                  GCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCACATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAG                                                                                                                 >  5:359908/1‑149
                                      GCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATC                                                                                                             <  6:352781/149‑1
                                      GCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCAT                                                                                                              <  6:359908/148‑1
                                       CGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCT                                                                                                            <  7:126848/149‑1
                                                                                                                                                  TCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCTGGAGTATCGGCGAGCTTCAAAGAAAGAAAGCTACGAGCAGAAGGTGGACAAGCGTTTTGCTGCGATATCTGGCTTGGTTGCTCGCCAAAATGAAATCCTCGCGAGC  >  7:273946/1‑148
                                                                                                                                                                                                                                                                                                      
TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6164871‑6165018
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCTGGAGTATCGGCGAGCTTCAAAGAAAGAAAGCTACGAGCAGAAGGTGGACAAGCGTTTTGCTGCGATATCTGGCTTGGTTGCTCGCCAAAATGAAATCCTCGCGAGC  <  NC_002947/6165050‑6164905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.