| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6165018 | 96 (1.500) | 5 (0.080) | 5/248 | NT | 5.3% | coding (265/2013 nt) | PP_5405 | transposase |
| ? | NC_002947 | = 6165050 | 84 (1.340) | coding (233/2013 nt) | PP_5405 | transposase | |||||
TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6164871‑6165018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCTGGAGTATCGGCGAGCTTCAAAGAAAGAAAGCTACGAGCAGAAGGTGGACAAGCGTTTTGCTGCGATATCTGGCTTGGTTGCTCGCCAAAATGAAATCCTCGCGAGC < NC_002947/6165050‑6164905 TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCT < 6:101301/147‑1TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCT < 6:229911/147‑1 ATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGC > 5:352781/1‑148 GCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCACATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAG > 5:359908/1‑149 GCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATC < 6:352781/149‑1 GCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCAT < 6:359908/148‑1 CGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCT < 7:126848/149‑1 TCCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCTGGAGTATCGGCGAGCTTCAAAGAAAGAAAGCTACGAGCAGAAGGTGGACAAGCGTTTTGCTGCGATATCTGGCTTGGTTGCTCGCCAAAATGAAATCCTCGCGAGC > 7:273946/1‑148 TGGCGTAGGCGTTAATTAGGGCGTCAGGATCATCGCTCGCGAGGATTTCATTTTGGCGAGCAACCAAGCCAGATATCGCAGCAAAACGCTTGTCCACCTTCTGCTCGTAGCTTTCTTTCTTTGAAGCTCGCCGATACTCCAGATGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6164871‑6165018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcCATGGCTTACACCCATCGAGGGCGTTGCCATCGAGCATCTGGAGTATCGGCGAGCTTCAAAGAAAGAAAGCTACGAGCAGAAGGTGGACAAGCGTTTTGCTGCGATATCTGGCTTGGTTGCTCGCCAAAATGAAATCCTCGCGAGC < NC_002947/6165050‑6164905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |