New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 327958	64 (1.000)	4 (0.070)	4/242	NT	6.1%	coding (1292/1368 nt)	PP_0270	sensor histidine kinase
	?	NC_002947	= 327985	63 (1.030)					coding (1265/1368 nt)	PP_0270	sensor histidine kinase

TTACCTGATTGCGAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGGTCGTCGATGTGGATGAAC  >  NC_002947/327814‑328104                                                                                                                                                    |                                                                                                                                                   ttACCTGATTGCGAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTATTTCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCAtgg‑ctggc                                                                                                                                                   <  1:322788/147‑1 (MQ=255)   aCCTGATTGCGAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGa                                                                                                                                              >  4:53568/1‑149 (MQ=255)            cGAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTggg                                                                                                                                     <  3:235876/149‑1 (MQ=255)             gAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTggg                                                                                                                                     >  3:275739/1‑148 (MQ=255)             gAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTggg                                                                                                                                     >  7:194042/1‑148 (MQ=255)               aTTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTGACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCaa                                                                                                                                  >  1:336439/1‑149 (MQ=255)                  cccTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATg                                                                                                                                <  3:53568/148‑1 (MQ=255)                     tGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGggctgagcattgcccagcggatcg                                                                                                                            >  5:248742‑M1/1‑125 (MQ=255)                            cgcAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TTCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCccag                                                                                                                     >  6:182449‑M2/1‑145 (MQ=255)                            cgcAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCccag                                                                                                                     <  2:170904‑M2/149‑5 (MQ=255)                               aGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGggctgagcattgcccagcggatcgccgccagcca                                                                                                                  <  6:248742‑M1/149‑35 (MQ=255)                               aGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCccagcc                                                                                                                   <  4:343779‑M2/148‑7 (MQ=255)                                    tATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATc                                                                                                             >  6:93737/1‑149 (MQ=255)                                      tGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATACTCAGCCCCAGCCCATATccg                                                                                                           >  5:163746/1‑149 (MQ=255)                                           tgGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGa                                                                                                      >  6:61493/1‑149 (MQ=255)                                             gggCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATg                                                                                                    >  8:71019/1‑149 (MQ=255)                                                    tCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTggcgg                                                                                                                                                 <  2:174109/97‑1 (MQ=255)                                                    tCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTggcgg                                                                                                                                                 >  1:174109/1‑97 (MQ=255)                                                      ccACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAc                                                                                           >  1:15678/1‑149 (MQ=255)                                                      ccACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAc                                                                                           >  8:534/1‑149 (MQ=255)                                                       cacaGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcg                                                                                          <  6:19280/149‑1 (MQ=255)                                                        acaGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTg                                                                                                                                       <  8:133149/103‑1 (MQ=255)                                                        acaGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTg                                                                                                                                       >  7:133149/1‑103 (MQ=255)                                                        acaGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcgc                                                                                         >  7:26573/1‑149 (MQ=255)                                                        acaGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcgc                                                                                         >  3:44967/1‑149 (MQ=255)                                                         caGAAGATCGCGTTAGCCATGCAGCAGTA‑AGCCGACCCGCAATCCACC‑GCTCTCACGGTTCGACAAAATCAGCTCACCCCCATGGCCTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcgc                                                                                         <  1:121471/149‑1 (MQ=255)                                                          agaagaTCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGa                                                                                       <  7:534/149‑1 (MQ=255)                                                           gaagaTCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGAt                                                                                      <  8:194042/149‑1 (MQ=255)                                                            aagaTCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACCGGATATCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGCATGCCTGGTTAcgcag                                                                                       >  1:90052/1‑146 (MQ=255)                                                            aagaTCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcg                                                                                          <  2:90052/144‑1 (MQ=255)                                                             agaTCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATcc                                                                                    <  1:368949/149‑1 (MQ=255)                                                              gaTCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATccc                                                                                   <  2:15678/149‑1 (MQ=255)                                                                tCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCt                                                                                                                                        <  4:21950/94‑1 (MQ=255)                                                                tCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCt                                                                                                                                        >  3:21950/1‑94 (MQ=255)                                                                tCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTc                                                                                                                             >  7:169959/1‑105 (MQ=255)                                                                tCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTc                                                                                                                             <  8:169959/105‑1 (MQ=255)                                                                tCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCt                                                                                  >  4:398869/1‑148 (MQ=255)                                                                    gTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCACACcg                                                                             >  1:169900/1‑149 (MQ=255)                                                                     ttAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACcgc                                                                            >  6:30740/1‑149 (MQ=255)                                                                        gCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCa                                                                         >  3:61047/1‑149 (MQ=255)                                                                         ccAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGggctgagcattgcccagcggatcgccgccagccatgg                                                                                                               >  3:67218‑M1/1‑73 (MQ=255)                                                                         ccAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGggctgagcattgcccagcggatcgccgccagccatgg                                                                                                               <  4:67218‑M1/110‑38 (MQ=255)                                                                          cAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCgcgc                                                                          <  8:194662/146‑1 (MQ=255)                                                                          cAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCgcgc                                                                          >  7:194662/1‑146 (MQ=255)                                                                          cAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCAc                                                                        >  6:69354/1‑148 (MQ=255)                                                                             gcagcaGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAAc                                                                    <  4:61047/149‑1 (MQ=255)                                                                                     a‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCgg                                                             <  2:336439/148‑1 (MQ=255)                                                                                            aCCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATg                                                        <  5:30740/147‑1 (MQ=255)                                                                                              ccGCAATCCACC‑GCTCTCCCGGTTCGACAATATCAGCTCACCCCCATGG‑ATGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCg                                                    >  1:43700/1‑149 (MQ=255)                                                                                                     ccACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGCGTCGGTGATGGTCGGcagcag                                             >  8:290617/1‑149 (MQ=255)                                                                                                       aCC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCAAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAgcg                                           >  4:29446/1‑149 (MQ=255)                                                                                                             tctcACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGc                                      >  8:286589/1‑149 (MQ=255)                                                                                                                 aCGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGtt                                                                                             >  3:351830/1‑90 (MQ=255)                                                                                                                 aCGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGtt                                                                                             <  4:351830/90‑1 (MQ=255)                                                                                                                 aCGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGa                                    <  5:69354/147‑1 (MQ=255)                                                                                                                   ggTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcg                                                                                          <  2:246689/91‑1 (MQ=255)                                                                                                                   ggTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTAcg                                                                                          >  1:246689/1‑91 (MQ=255)                                                                                                                        gACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTg                            <  5:61493/148‑1 (MQ=255)                                                                                                                         aCAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGgca                                                 <  6:115349/126‑1 (MQ=255)                                                                                                                         aCAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGt                          >  5:136938/1‑149 (MQ=255)                                                                                                                                cAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGgcagca                                              >  6:6813/1‑122 (MQ=255)                                                                                                                                cAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGgcagca                                              <  5:6813/122‑1 (MQ=255)                                                                                                                                   cTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGgtcgt                <  4:275739/149‑1 (MQ=255)                                                                                                                                   cTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGgtcgt                <  1:170904/149‑1 (MQ=255)                                                                                                                                   cTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGgtcgt                <  3:29446/149‑1 (MQ=255)                                                                                                                                    tCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGa                                                          >  8:290784/1‑106 (MQ=255)                                                                                                                                    tCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGa                                                          <  7:290784/106‑1 (MQ=255)                                                                                                                                      aCCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGgtcgt                <  4:313336/146‑1 (MQ=255)                                                                                                                                      aCCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGgtcgt                >  3:313336/1‑146 (MQ=255)                                                                                                                                       cccccATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGGTCGTCGAt            <  3:398869/149‑1 (MQ=255)                                                                                                                                       cccccATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGGTCGTCGAt            <  4:44967/149‑1 (MQ=255)                                                                                                                                        ccccATGG‑CTGGCGGCGAACCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGGTCGTCGAtg           >  7:250814/1‑149 (MQ=255)                                                                                                                                          ccATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCccagccatgggggtgagctgatattgtcgaaccgtgagagcggtggattgcgggtcagcatactgctgcctgg                                                >  3:67218‑M2/1‑37 (MQ=255)                                                                                                                                          ccATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCccagccatgggggtgagctgatattgtcgaaccgtgagagcggtggattgcgggtcagcatactgctgcctgg                                                <  4:67218‑M2/110‑74 (MQ=255)                                                                                                                                          ccATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTg                            >  7:77567/1‑130 (MQ=255)                                                                                                                                          ccATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTg                            <  8:77567/130‑1 (MQ=255)                                                                                                                                             tgg‑ctggcGGCGATCCGCTGGGCAATGCTCAGCCccagccatgggggtgagctgatattgtcgaaccgtgagagcggtggattgcgggtcagcatactgctgcctggctaacgcgatcttctgtgggagcagccccacaccataggact      <  6:248742‑M2/149‑116 (MQ=255)                                                                                                                                              gg‑CTGGggctgagcattgcccagcggatcgccgccagccatgggggtgagctgatattgtcgaaccgtgagagcggtggattgcgggtcagcatactgctgcctggctaacgcgatcttctgtgggagcagccccacaccataggact      <  4:343779‑M1/148‑143 (MQ=255)                                                                                                                                                 cTGGggctgagcattgcccagcggatcgccgccagccatgggggtgagctgatattgtcgaaccgtgagagcggtggattgcgggtcagcatactgctgcctggctaacgcgatcttctgtgggagcagccccacaccataggactgcg   <  2:170904‑M1/149‑146 (MQ=255)                                                                                                                                                 cTGGggctgagcattgcccagcggatcgccgccagccatgggggtgagctgatattgtcgaaccgtgagagcggtggattgcgggtcagaatactgctgcctggctaacgcgatcttctgtgggagcagccccacaccataggactgcg   >  6:182449‑M1/1‑4 (MQ=255)                                                                                                                                                  tggcGGCGATCCGCTGGGCAATGCTCAGCCGCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGGTCGTCGATGTGGATGAac  <  7:71019/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TTACCTGATTGCGAATTCCCTGGCCTGCGCAGTCCTATGGTGTGGGGCTGCTCCCACAGAAGATCGCGTTAGCCAGGCAGCAGTA‑TGCTGACCCGCAATCCACC‑GCTCTCACGGTTCGACAATATCAGCTCACCCCCATGG‑CTGGCGGCGATCCGCTGGGCAATGCTCAGCCCCAGCCCATATCCGCCGGATGCCTGGTTACGCGATCCCTCACCGCGCACGAACGGGTCGGTGATGGTCGGCAGCAGCGCTGGCGAAATGCCTGGTCCACGGTCGTCGATGTGGATGAAC  >  NC_002947/327814‑328104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.