New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1540365 =	53 (0.830)	4 (0.060)	4/246	NT	6.9%	coding (205/2031 nt)	PP_1350	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	1540406 =	56 (0.900)					coding (164/2031 nt)	PP_1350	two‑component system sensor histidine kinase/response regulator

GCGAAAACGCTTGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACC  >  NC_002947/1540219‑1540507                                                                                                                                                   |                                                                                                                                               gCGAAAACGCTTGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCAATCGGCCATCGCCAACGTAGACAGCGGCGGCGCGTAGCGGAGTGTAACTTACCAGTTCCTTGAGCAGGGCACGGGACGTTTCGGGGGTGTCGcctg                                                                                                                                              >  7:339308/1‑147 (MQ=255)   gAAAACGCTTGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGgcg                                                                                                                                            >  6:184707/1‑149 (MQ=255)      aaCGCTTGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCgg                                                                                                                                         <  7:209726/149‑1 (MQ=255)        cGCTTGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCTGCATTAGGCCATCGCCACCGTAGACCGCGGAGGCGCGTAGCGGTGTGTAACTTTCCTGTTCCTTGTGCAGGGCACGGGCAGTTTCCGGTGTGTCGCCGGCGCGGGc                                                                                                                                       <  8:339308/149‑1 (MQ=255)           ttGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCggg                                                                                                                                        >  1:162957/1‑145 (MQ=255)                 aGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTg                                                                                                                              <  2:118086/149‑1 (MQ=255)                     ccAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCgg                                                                                                                                         >  4:66944/1‑134 (MQ=255)                     ccAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCgg                                                                                                                                         <  3:66944/134‑1 (MQ=255)                       aGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGAtt                                                                                                                        >  1:158615/1‑149 (MQ=255)                        gcggcgCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTg                                                                                                                       <  8:367495/149‑1 (MQ=255)                        gCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTg                                                                                                                       <  1:344973/149‑1 (MQ=255)                             tCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGccac                                                                                                                  >  8:227591/1‑149 (MQ=255)                                 cATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGAtt                                                                                                                        <  4:109691/139‑1 (MQ=255)                                 cATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGAtt                                                                                                                        >  3:109691/1‑139 (MQ=255)                                      tgcAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAgccggcc                                                                                                         >  1:21313/1‑149 (MQ=255)                                      tgcAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAgccggcc                                                                                                         >  8:330592/1‑149 (MQ=255)                                       gcAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAgccggcc                                                                                                         >  4:398200/1‑148 (MQ=255)                                        cAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAgccgggc                                                                                                         <  2:158615/147‑3 (MQ=255)                                         aaCTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGAt                                                                                                      >  3:27136/1‑149 (MQ=255)                                                ccAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGc                                                                                               <  3:398200/149‑1 (MQ=255)                                                 cAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCa                                                                                              >  1:52056/1‑149 (MQ=255)                                                    cATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATgg                                                                                           >  7:273966/1‑149 (MQ=255)                                                     aTTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGc                                                                                          <  7:330592/149‑1 (MQ=255)                                                        cGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCt                                                                                        <  2:131317/148‑1 (MQ=255)                                                           ccATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTgggg                                                                                    <  7:161144/149‑1 (MQ=255)                                                                 ccACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCAt                                                                              <  5:342974/149‑1 (MQ=255)                                                                 ccACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCAt                                                                              >  6:342974/1‑149 (MQ=255)                                                                  cACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATGGTCTGCATGGCCTGGGGCGCCATg                                                                             >  4:26002/1‑149 (MQ=255)                                                                        ggccaacctcaccttcatcagcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCg                                                                                                                                               <  5:407083‑M1/2‑1 (MQ=255)                                                                        ggccaacctcaccttcatcagcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCg                                                                                                                                               >  6:407083‑M1/76‑77 (MQ=255)                                                                         gACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCt                                                                      >  7:17805/1‑149 (MQ=255)                                                                            cgcgGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                   >  4:170200/1‑149 (MQ=255)                                                                            cgcgGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                   >  5:280065/1‑149 (MQ=255)                                                                               ctcaccttcatcagcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATg                                                                                                     <  4:323443‑M1/44‑1 (MQ=255)                                                                               ctcaccttcatcagcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATg                                                                                                     >  3:323443‑M1/69‑112 (MQ=255)                                                                                 cggcgCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATc                                                              <  8:17805/149‑1 (MQ=255)                                                                                  ggcgCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTGCCGGGGGGTCGCCGGCGCGGGCTGCAAGGTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCGTGGGTGATcc                                                             >  5:294611/1‑149 (MQ=255)                                                                                            gcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATgg                                                                                                    <  6:374384‑M1/45‑1 (MQ=255)                                                                                            gcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATgg                                                                                                    >  5:374384‑M1/56‑100 (MQ=255)                                                                                             gtgtgtAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGgcggcg                                                  >  2:109739/1‑149 (MQ=255)                                                                                               gtgtAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGgcgc                                                 <  2:243821/148‑1 (MQ=255)                                                                                               gtgtAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGgcgc                                                 >  1:243821/1‑148 (MQ=255)                                                                                                  tAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtgat                                             >  1:370298/1‑149 (MQ=255)                                                                                                  tAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtga                                              <  2:52056/148‑1 (MQ=255)                                                                                                  tAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGGCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtgat                                             <  3:48030/149‑1 (MQ=255)                                                                                                   aaCTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtgat                                             >  3:143506/1‑148 (MQ=255)                                                                                                      tttCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAg                                         >  4:51265/1‑149 (MQ=255)                                                                                                      tttCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAg                                         >  7:256906/1‑149 (MQ=255)                                                                                                        tCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAg                                         <  8:273966/147‑1 (MQ=255)                                                                                                         ccAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGt                                       <  3:51265/148‑1 (MQ=255)                                                                                                           aGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAg                                    >  2:316045/1‑149 (MQ=255)                                                                                                                cTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTg                                <  3:26002/148‑1 (MQ=255)                                                                                                                     gCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATc                          <  4:143506/149‑1 (MQ=255)                                                                                                                           cACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                   <  2:32179/102‑1 (MQ=255)                                                                                                                           cACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                   >  1:32179/1‑102 (MQ=255)                                                                                                                              gggCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATg                 <  2:370298/149‑1 (MQ=255)                                                                                                                                   gTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCAc            <  7:251105/149‑1 (MQ=255)                                                                                                                                      tCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCa          <  1:109739/148‑1 (MQ=255)                                                                                                                                      tCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAg         >  4:62509/1‑149 (MQ=255)                                                                                                                                          gggTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTgg                                                                    <  3:83529/86‑1 (MQ=255)                                                                                                                                          gggTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTgg                                                                    >  4:83529/1‑86 (MQ=255)                                                                                                                                                   CGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCGGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAcc  >  6:381493‑M1/1‑143 (MQ=255)                                                                                                                                                   CGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCGGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAcc  <  5:381493‑M1/143‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                               GCGAAAACGCTTGGGCAGGGCCAGCGGCTCGCCATGCTGCAACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACC  >  NC_002947/1540219‑1540507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.