New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1540365 =	53 (0.830)	4 (0.060)	4/246	NT	6.9%	coding (205/2031 nt)	PP_1350	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	1540406 =	56 (0.900)					coding (164/2031 nt)	PP_1350	two‑component system sensor histidine kinase/response regulator

AACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTGCCCGACCGGGAGGT  >  NC_002947/1540259‑1540544                                                                                                                                                    |                                                                                                                                           aaCTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGAt                                                                                                                                           >  3:27136/1‑149 (MQ=255)        ccAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGc                                                                                                                                    <  3:398200/149‑1 (MQ=255)         cAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCa                                                                                                                                   >  1:52056/1‑149 (MQ=255)            cATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATgg                                                                                                                                >  7:273966/1‑149 (MQ=255)             aTTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGc                                                                                                                               <  7:330592/149‑1 (MQ=255)                cGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCt                                                                                                                             <  2:131317/148‑1 (MQ=255)                   ccATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTgggg                                                                                                                         <  7:161144/149‑1 (MQ=255)                         ccACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCAt                                                                                                                   <  5:342974/149‑1 (MQ=255)                         ccACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCAt                                                                                                                   >  6:342974/1‑149 (MQ=255)                          cACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATGGTCTGCATGGCCTGGGGCGCCATg                                                                                                                  >  4:26002/1‑149 (MQ=255)                                 gACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCt                                                                                                           >  7:17805/1‑149 (MQ=255)                                    cgcgGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                                                        >  4:170200/1‑149 (MQ=255)                                    cgcgGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                                                        >  5:280065/1‑149 (MQ=255)                                       ctcaccttcatcagcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATg                                                                                                                                          >  3:323443‑M1/69‑112 (MQ=255)                                       ctcaccttcatcagcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATg                                                                                                                                          <  4:323443‑M1/44‑1 (MQ=255)                                         cggcgCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATc                                                                                                   <  8:17805/149‑1 (MQ=255)                                          ggcgCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTGCCGGGGGGTCGCCGGCGCGGGCTGCAAGGTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCGTGGGTGATcc                                                                                                  >  5:294611/1‑149 (MQ=255)                                                    gcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATgg                                                                                                                                         <  6:374384‑M1/45‑1 (MQ=255)                                                    gcgccgcctactggatcacccaggaaagcatggcgccccaggccatgcagaccatCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATgg                                                                                                                                         >  5:374384‑M1/56‑100 (MQ=255)                                                     gtgtgtAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGgcggcg                                                                                       >  2:109739/1‑149 (MQ=255)                                                       gtgtAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGgcgc                                                                                      <  2:243821/148‑1 (MQ=255)                                                       gtgtAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGgcgc                                                                                      >  1:243821/1‑148 (MQ=255)                                                          tAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtgat                                                                                  >  1:370298/1‑149 (MQ=255)                                                          tAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtga                                                                                   <  2:52056/148‑1 (MQ=255)                                                          tAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGGCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtgat                                                                                  <  3:48030/149‑1 (MQ=255)                                                           aaCTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCtgat                                                                                  >  3:143506/1‑148 (MQ=255)                                                              tttCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAg                                                                              >  7:256906/1‑149 (MQ=255)                                                              tttCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAg                                                                              >  4:51265/1‑149 (MQ=255)                                                                tCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAg                                                                              <  8:273966/147‑1 (MQ=255)                                                                 ccAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGt                                                                            <  3:51265/148‑1 (MQ=255)                                                                   aGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAg                                                                         >  2:316045/1‑149 (MQ=255)                                                                        cTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGTCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTg                                                                     <  3:26002/148‑1 (MQ=255)                                                                             gCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATc                                                               <  4:143506/149‑1 (MQ=255)                                                                                   cACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                                                        >  1:32179/1‑102 (MQ=255)                                                                                   cACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTggg                                                                                                        <  2:32179/102‑1 (MQ=255)                                                                                      gggCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATg                                                      <  2:370298/149‑1 (MQ=255)                                                                                           gTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCAc                                                 <  7:251105/149‑1 (MQ=255)                                                                                              tCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCa                                               <  1:109739/148‑1 (MQ=255)                                                                                              tCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAg                                              >  4:62509/1‑149 (MQ=255)                                                                                                  gggTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTgg                                                                                                         >  4:83529/1‑86 (MQ=255)                                                                                                  gggTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTgg                                                                                                         <  3:83529/86‑1 (MQ=255)                                                                                                       ccatcgaccggctggtggccaatcctcagcttgcagcccgcgccgATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGgcgc                                                                                      <  6:374384‑M2/55‑1 (MQ=255)                                                                                                       ccatcgaccggctggtggccaatcctcagcttgcagcccgcgccgATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGgcgc                                                                                      >  5:374384‑M2/46‑100 (MQ=255)                                                                                                        catcggccggctggtggccaatcctcagcttgcagcccgcgccgATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAg                                                                         <  4:323443‑M2/68‑1 (MQ=255)                                                                                                        catcggccggctggtggccaatcctcagcttgcagcccgcgccgATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAg                                                                         >  3:323443‑M2/45‑112 (MQ=255)                                                                                                           CGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCGGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAcc                                       >  6:381493‑M1/1‑143 (MQ=255)                                                                                                           CGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCGGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAcc                                       <  5:381493‑M1/143‑1 (MQ=255)                                                                                                            GGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAggg                                >  4:247865‑M1/1‑149 (MQ=255)                                                                                                              CGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGcc                              <  6:15260‑M1/149‑1 (MQ=255)                                                                                                                cgGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGgccgc                            <  5:184707/149‑1 (MQ=255)                                                                                                                   gCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCcag                         <  5:15260/149‑1 (MQ=255)                                                                                                                     tGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCcag                         >  7:309965/1‑147 (MQ=255)                                                                                                                     tGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCcag                         >  7:251712/1‑147 (MQ=255)                                                                                                                       cAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCagcagc                     <  6:280065/149‑1 (MQ=255)                                                                                                                        aaGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCt                    >  3:328410/1‑149 (MQ=255)                                                                                                                         aGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCtt                   <  2:21313/149‑1 (MQ=255)                                                                                                                          gCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTc                  >  2:270879/1‑149 (MQ=255)                                                                                                                           cTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTACt                 >  6:17041/1‑149 (MQ=255)                                                                                                                            tGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTg                >  1:88795/1‑149 (MQ=255)                                                                                                                              aGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAATGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAc                                        <  2:65711/123‑1 (MQ=255)                                                                                                                              aGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAc                                        <  2:244922/123‑1 (MQ=255)                                                                                                                              aGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAc                                        >  1:65711/1‑123 (MQ=255)                                                                                                                              aGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATAc                                        >  1:244922/1‑123 (MQ=255)                                                                                                                                      ccaccaGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGgcc                              <  6:19466/125‑1 (MQ=255)                                                                                                                                      ccaccaGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGgcc                              >  5:19466/1‑125 (MQ=255)                                                                                                                                       caccaGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCATGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTGCCCGACCgg       >  1:335593/1‑147 (MQ=255)                                                                                                                                        accaGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTGCCCGACCGGGAg    <  7:227591/149‑1 (MQ=255)                                                                                                                                        accaGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTGCCCGACCGGGAg    >  5:160242/1‑149 (MQ=255)                                                                                                                                          caGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTGCCCGACCGGGAGGt  >  4:42116/1‑149 (MQ=255)                                                                                                                                                  cgATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGcc                                                                  >  6:407083‑M2/3‑77 (MQ=255)                                                                                                                                                  cgATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGcc                                                                  <  5:407083‑M2/75‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                           AACTGCGCCAGCATTCGGCCATCGCCACCGTAGACCGCGGCGGCGCGTAGCGGTGTGTAACTTTCCAGTTCCTTGAGCAGGGCACGGGCCGTTTCCGGGGTGTCGCCGGCGCGGGCTGCAAGCTGAGGATTGGCCACCAGCCGGCCGATGGTCTGCATGGCCTGGGGCGCCATGCTTTCCTGGGTGATCCAGTAGGCGGCGCTGATGAAGGTGAGGTTGGCCATCAGCAAGATGGTCACCAGCAATACCAGCAGGGCCGCCAGCAGCTTCTGCCCGACCGGGAGGT  >  NC_002947/1540259‑1540544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.