New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2273507 =	55 (0.860)	3 (0.050)	3/244	NT	5.7%	coding (860/1041 nt)	PP_2004	AraC family transcriptional regulator
	?	NC_002947	2273535 =	47 (0.760)					coding (832/1041 nt)	PP_2004	AraC family transcriptional regulator

CCCGGCGTGAGGCCCGTCCAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATGCGCTCACCCAGACTGCG  >  NC_002947/2273360‑2273655                                                                                                                                                    |                                                                                                                                                      cccGGCGTGAGGCCCGTCCAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTc                                                                                                                                                      <  5:77595/149‑1 (MQ=255)  ccGGCGTGAGGCCCGTCCAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTcg                                                                                                                                                     >  7:141800/1‑149 (MQ=255)  ccGGCGTGAGGCCCGTCCAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTAACTCGCCAAAGGCCAGCGCCCTGTCACGGATGTACTTCTCGGCCAGGTCGCGCCGAGTTTACTTGAGAAGGTcg                                                                                                                                                     >  8:311489/1‑149 (MQ=255)   gagctgctgcagcgcacgcgggtgcgcagtctgggtgagcgcatcacccacctgctgggcccgctgctcaatggcggccgtgaaccggacctggaagaagtggcgctgcacttgcagctaccaagctggaccttgcgccgcaagcTcgc                                                                                                                                                    >  7:64642‑M1/146‑149 (MQ=255)              ccGTCCAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTg                                                                                                                                        >  5:58854/1‑149 (MQ=255)                   cAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTtc                                                                                                                                   <  6:58854/149‑1 (MQ=255)                    aGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGaa‑a                                                                                                                                               <  3:268568/136‑1 (MQ=255)                    aGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGCTCGCTCAGGGTTTCGTTGAGCAGGTCGCGaa‑a                                                                                                                                               >  4:268568/1‑136 (MQ=255)                           gAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTtc                                                                                                                                   >  7:320860/1‑141 (MQ=255)                           gAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTtc                                                                                                                                   <  8:320860/141‑1 (MQ=255)                              tGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCt                                                                                                                        <  6:331046/149‑1 (MQ=255)                                cgcgcTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCtt                                                                                                                       <  4:227900/148‑1 (MQ=255)                                cgcgcTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTCCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTg                                                                                                                      <  8:289521/149‑1 (MQ=255)                                 gcgcTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTgc                                                                                                                     >  5:223482/1‑149 (MQ=255)                                  tgggtgagcgcatcacccacctgctgggcccgctgctcaatggcggccgtgaaccggacctggaagaagtggcgctgcacttgcagctaccaagctggaccttgcgccgcaagcTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTgcg                                                                                                                    >  3:42997‑M1/115‑149 (MQ=255)                                   gcTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGCCTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCGCCGCGAGCTGgcgg                                                                                                                   >  7:283154/1‑149 (MQ=255)                                       gAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGgcgc                                                                                                                >  3:68089/1‑148 (MQ=255)                                       gAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGCTCTCGGCCATGTCGCGCACGGTATAGTTGAACAGCTCGCGAA‑AGCGCGACACTTCCTCCGCGAGCTTGCGgcgc                                                                                                                >  6:28590/1‑148 (MQ=255)                                            ccTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGATCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTc                                                                                                          <  5:28590/149‑1 (MQ=255)                                             cTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAACGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTc                                                                                                          >  1:139443/1‑148 (MQ=255)                                                    gAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTgg                                                                                                  <  6:223482/149‑1 (MQ=255)                                                      aGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTgg                                                                                                  >  3:24602/1‑147 (MQ=255)                                                      aGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTa                                                                                                <  2:12127/149‑1 (MQ=255)                                                       gCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAACAGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAg                                                                                                             <  1:268868/136‑1 (MQ=255)                                                       gCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGCTCGCGCCCCGTTTAGTAGAGAAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAg                                                                                                             >  2:268868/1‑135 (MQ=255)                                                        cAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGc                                                                                              <  8:141800/149‑1 (MQ=255)                                                             cccAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCaa                                                                                                              <  6:73612/128‑1 (MQ=255)                                                             cccAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCaa                                                                                                              >  5:73612/1‑128 (MQ=255)                                                             cccAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTAAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCaa                                                                                         >  3:265887/1‑149 (MQ=255)                                                              ccAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAg                                                                                        >  7:215693/1‑149 (MQ=255)                                                                   aGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAg                                                                                   >  7:370862/1‑149 (MQ=255)                                                                    gATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGTGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAgc                                                                                  <  8:215693/149‑1 (MQ=255)                                                                         gCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGGTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCAc                                                                             >  5:217165/1‑149 (MQ=255)                                                                                cGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCAGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACttcttc                                                                       >  4:248003/1‑148 (MQ=255)                                                                                 gCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTAGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACttcttc                                                                       >  2:411174/1‑147 (MQ=255)                                                                                   cAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTcc                                                                      <  7:311489/146‑1 (MQ=255)                                                                                   cAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAgg                                                                   >  3:83688/1‑149 (MQ=255)                                                                                        gCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTCAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCgg                                                              <  4:265887/149‑1 (MQ=255)                                                                                                 gtgtCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGgcc                                                     <  4:24602/149‑1 (MQ=255)                                                                                                       cGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCAtt                                               <  3:248003/149‑1 (MQ=255)                                                                                                          aTGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTgcg                                                                                                                    <  5:18020/77‑1 (MQ=255)                                                                                                          aTGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTgcg                                                                                                                    >  6:18020/1‑77 (MQ=255)                                                                                                              aGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCCAGGCCGCCATTGagcagc                                        >  4:44130/1‑149 (MQ=255)                                                                                                               ggTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCg                                       >  3:138772/1‑149 (MQ=255)                                                                                                                gTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGC‑TGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACGTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCggg                                     >  2:127886/1‑149 (MQ=255)                                                                                                                 tctcGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCggg                                     >  2:181527/1‑149 (MQ=255)                                                                                                                  ttgcagctaccaagctggaccttgcgccgcaagcTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGc                                                                                                                         <  8:326794‑M1/30‑1 (MQ=255)                                                                                                                  ttgcagctaccaagctggaccttgcgccgcaagcTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGc                                                                                                                         >  7:326794‑M1/35‑64 (MQ=255)                                                                                                                  ctcGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGc                                    >  1:392781/1‑149 (MQ=255)                                                                                                                       ccAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCcagc                               <  6:217165/149‑1 (MQ=255)                                                                                                                            tCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAggtg                          >  2:69076/1‑149 (MQ=255)                                                                                                                              gcgcCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAggtggg                        <  4:83688/149‑1 (MQ=255)                                                                                                                              gagacGGGTTTCGTTGAGCTGGTGGCTAA‑AGCGCGTGCCTTCCTCCGCTAGCTTGCGGCGCAAGGTCGAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCGTCCATTGAGCAGCGGGCCCAGCAggtggg                        <  8:370862/145‑1 (MQ=255)                                                                                                                                gcCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAggtgggt                       >  2:116084/1‑148 (MQ=255)                                                                                                                                  cGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGAt                    <  1:116084/149‑1 (MQ=255)                                                                                                                                     gTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGc                                                                                     <  5:16755/81‑1 (MQ=255)                                                                                                                                     gTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGc                                                                                     >  6:16755/1‑81 (MQ=255)                                                                                                                                      tttCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATgcgc                >  6:109889/1‑149 (MQ=255)                                                                                                                                        tCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATGCGCt               <  4:68089/148‑1 (MQ=255)                                                                                                                                          gTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATGCGCTCAc            >  5:394902/1‑149 (MQ=255)                                                                                                                                            tGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCAc                                                         >  2:257112/1‑102 (MQ=255)                                                                                                                                            tGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCAc                                                         <  1:257112/102‑1 (MQ=255)                                                                                                                                               gCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATGCGCTGACCCAGa       >  1:165992/1‑149 (MQ=255)                                                                                                                                                    TCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATGCGCTCACCCAGACTgcg  >  1:411174‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CCCGGCGTGAGGCCCGTCCAGCGCTTGAATGCGCGCTGGAAGGCCTCGGCCGAAGCAAACCCCAACAGATAGGCTATCTCGCCAAAGGCCAGCGCCGTGTCACGGATGTAGGTCTCGGCCAGGTCGCGCCGGGTTTCGTTGAGCAGGTCGCGAA‑AGCGCGTGCCTTCCTCCGCGAGCTTGCGGCGCAAGGTCCAGCTTGGTAGCTGCAAGTGCAGCGCCACTTCTTCCAGGTCCGGTTCACGGCCGCCATTGAGCAGCGGGCCCAGCAGGTGGGTGATGCGCTCACCCAGACTGCG  >  NC_002947/2273360‑2273655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.