New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2404594	50 (0.780)	3 (0.050)	3/244	NT	5.9%	intergenic (+12/‑62)	PP_2106/PP_2107	ammonium transporter/hypothetical protein
	?	NC_002947	= 2404646	48 (0.780)					intergenic (+64/‑10)	PP_2106/PP_2107	ammonium transporter/hypothetical protein

TGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGA  >  NC_002947/2404446‑2404738                                                                                                                                                      |                                                                                                                                                 tGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGT                                                                                                                                                  >  4:46196‑M1/1‑149 (MQ=255)   cTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTg                                                                                                                                                 <  3:46196/148‑1 (MQ=255)        ggCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGt                                                                                                                                           >  1:310597/1‑149 (MQ=255)           cTTGGCCGGTGGATTTGCCGTGTACGGGGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTggg                                                                                                                                        >  2:266570/1‑149 (MQ=255)           cTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTggg                                                                                                                                        >  6:376367/1‑149 (MQ=255)                ccGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTgg                                                                                                                                   >  3:49813/1‑149 (MQ=255)                  ggTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgcg                                                                                                                                 >  3:236092/1‑149 (MQ=255)                        tttGCCGTGTACTGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTa                                                                                                                           <  4:236092/149‑1 (MQ=255)                        tttGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTa                                                                                                                           <  5:422410/149‑1 (MQ=255)                             cGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGaa                                                                                                                        >  5:184631/1‑147 (MQ=255)                              gtgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAg                                                                                                                     <  4:374723/149‑1 (MQ=255)                               tgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCTGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAgg                                                                                                                    <  6:139184/149‑1 (MQ=255)                               tgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAgg                                                                                                                    <  7:368591/149‑1 (MQ=255)                                    ggAGCCATTCGTGCGCGGCATGGCCTGCGCTTGAGCCATGAGCAGGAGGTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCt                                                                                                               <  8:1071/149‑1 (MQ=255)                                      aGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCtgt                                                                                                             >  6:151772/1‑149 (MQ=255)                                      aGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCtgt                                                                                                             >  3:351869/1‑149 (MQ=255)                                      aGCCATTCGTGCGCTGCATGACCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCtgt                                                                                                             <  6:297115/149‑1 (MQ=255)                                          aTTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAg                                                                                                                                              <  5:272855/112‑1 (MQ=255)                                          aTTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAg                                                                                                                                              >  6:272855/1‑112 (MQ=255)                                          aTTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTAt                                                                                                         <  1:266570/149‑1 (MQ=255)                                           ttCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATg                                                                                                        <  2:310597/149‑1 (MQ=255)                                                gcgcTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGGCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAAc                                                                                                   >  1:175672/1‑149 (MQ=255)                                                           ccTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                                                                        <  2:175672/149‑1 (MQ=255)                                                               cgcTTTAGCCATGCGCAGGAGTTCCAGGGCGCGGCCCGGGCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGCTTGAGCCAGGTCAGGTcccgggttggcatacacagacgcctattctaggcgcgccacgcccaccctgcacctgacctg                                                                                    <  6:349799‑M1/149‑63 (MQ=255)                                                               cgcTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCcac                                                                                     <  5:235549/148‑1 (MQ=255)                                                                gcTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGcc                                                                                                                             <  3:307462/107‑1 (MQ=255)                                                                gcTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGcc                                                                                                                             >  4:307462/1‑107 (MQ=255)                                                                    gAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                                                                        >  1:236887/1‑140 (MQ=255)                                                                    gAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                                                                        <  2:236887/140‑1 (MQ=255)                                                                         aTGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacc                                                                                      >  7:190912‑M1/1‑77 (MQ=255)                                                                         aTGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacc                                                                                      <  8:190912‑M1/137‑61 (MQ=255)                                                                         aTGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTg                                                                           >  3:18037/1‑148 (MQ=255)                                                                            aGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTTAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAAt                                                                        <  4:49813/148‑1 (MQ=255)                                                                             gCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGt                                                                      <  5:376367/149‑1 (MQ=255)                                                                              cAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTc                                                                     <  4:18037/149‑1 (MQ=255)                                                                                       cAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                                                                        <  7:102475/121‑1 (MQ=255)                                                                                       cAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                                                                        >  8:102475/1‑121 (MQ=255)                                                                                       cAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTc                                                             <  6:184631/148‑1 (MQ=255)                                                                                       cAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCg                                                            >  7:124198/1‑149 (MQ=255)                                                                                                   cTGTCGCTGCACCGGATCGGTGCTACGCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCg                                                            >  1:4984/1‑138 (MQ=255)                                                                                                   cTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCg                                                            <  2:4984/137‑1 (MQ=255)                                                                                                        gCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCa                                            <  5:151772/148‑1 (MQ=255)                                                                                                               cGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGc                                     >  8:206960/1‑148 (MQ=255)                                                                                                                 gATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGaa                                  <  4:351869/149‑1 (MQ=255)                                                                                                                          tAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTc                                                                     <  1:99503/105‑1 (MQ=255)                                                                                                                          tAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTc                                                                     >  2:99503/1‑105 (MQ=255)                                                                                                                            c‑cagccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCC‑CGGCTGCCACCTCTGCGAAGTGGCCGAGACt                      >  5:193553/1‑149 (MQ=255)                                                                                                                            c‑cagccagGATTGAGCCAGGTCAGGTGCAAGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCt                                                                            >  6:160517/1‑96 (MQ=255)                                                                                                                            c‑cagccagGATTGAGCCAGGTCAGGTGCAAGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCt                                                                            <  5:160517/96‑1 (MQ=255)                                                                                                                                  cagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTgtgt                  <  7:206960/149‑1 (MQ=255)                                                                                                                                     gATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCAc                                                        >  8:201047/1‑108 (MQ=255)                                                                                                                                     gATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCAc                                                        <  7:201047/108‑1 (MQ=255)                                                                                                                                           gCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGa                          >  1:297219/1‑132 (MQ=255)                                                                                                                                           gCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGa                          <  2:297219/132‑1 (MQ=255)                                                                                                                                           gCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCctc         >  6:115555/1‑149 (MQ=255)                                                                                                                                             caggtcaggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTc                                                             <  3:152771/95‑1 (MQ=255)                                                                                                                                             caggtcaggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTc                                                             >  4:152771/1‑95 (MQ=255)                                                                                                                                             caggtcaggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCGTCTGTGTATGCCAACCCGGGacctgacctggctcaagcctggctggtagcaccgatccggtgcagcgcccgggccgcgccctggaactcctgcgcatggctaaagcg       <  6:349799‑M2/149‑88 (MQ=255)                                                                                                                                               ggtcaggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGacctgacctggctcaatcctggctggtagcaccgatccggtgcagcgacaggtccgcgccctggaactcctgctcat                 >  7:190912‑M2/1‑60 (MQ=255)                                                                                                                                               ggtcaggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGacctgacctggctcaatcctggctggtagcaccgatccggtgcagcgacaggtccgcgccctggaactcctgctcat                 <  8:190912‑M2/137‑78 (MQ=255)                                                                                                                                                  caggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGa  >  3:349693/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                 TGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGAGCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAC‑CAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGA  >  NC_002947/2404446‑2404738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.