New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2968028	37 (0.580)	4 (0.060)	4/248	NT	9.7%	coding (386/1794 nt)	PP_2596	ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 2968071	38 (0.610)					coding (343/1794 nt)	PP_2596	ABC transporter permease/ATP‑binding protein

CACGACCACGGCAAGGCGCCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGCCAGTGAACAGGC  >  NC_002947/2967880‑2968172                                                                                                                                                     |                                                                                                                                                 cACGACCACGGCAAGGCGCCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGC                                                                                                                                                  >  4:112393‑M1/1‑149 (MQ=255)     aCCACGGCAAGGCGCCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGa                                                                                                                                              <  3:285135/149‑1 (MQ=255)      ccACGGCAAGGCGCCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGAt                                                                                                                                             <  3:112393/149‑1 (MQ=255)         cGGCAAGGCGCCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGcc                                                                                                                                          <  1:197315/149‑1 (MQ=255)                 cgcCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCcgctcgct                                                                                                                                  <  6:101984/149‑1 (MQ=255)                  gcCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCcgctcgct                                                                                                                                  >  1:38842/1‑148 (MQ=255)                         cATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAg                                                                                                                           <  5:226838/148‑1 (MQ=255)                                      tAGGCCACGGAACTCCGCCCGGCGCCAACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCctgatgcaagtgccgctcggctggttcagcgagcggg                                                                                                             <  4:239308‑M1/149‑38 (MQ=255)                                        ggCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACt                                                                                                               <  1:33630/145‑1 (MQ=255)                                        ggCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACt                                                                                                               >  2:33630/1‑145 (MQ=255)                                        ggCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGc                                                                                                            <  4:277330/148‑1 (MQ=255)                                         gCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCAt                                                                                                          >  5:263532/1‑149 (MQ=255)                                          ccACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTg                                                                                                                                               <  6:196316/111‑1 (MQ=255)                                          ccACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCAt                                                                                                          >  6:237540/1‑148 (MQ=255)                                          ccACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGGGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTg                                                                                                                                               >  5:196316/1‑111 (MQ=255)                                                 aaTCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCt                                                                                                  <  1:354179/149‑1 (MQ=255)                                                       cACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCGTGGCCCGTTTCACTTCGCctgatgcaagtgccgctcggctggttcagcgagcgggcatcaagcgaagtgaaa                                                                                            <  6:177729‑M1/149‑55 (MQ=255)                                                              cccACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCAc                                                                                     <  4:116624/149‑1 (MQ=255)                                                               ccACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTCGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCAcg                                                                                    >  5:4571/1‑149 (MQ=255)                                                                         gCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAggtgat                                                                          >  3:158698/1‑149 (MQ=255)                                                                                    tgAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTgg                                                               >  3:30379/1‑149 (MQ=255)                                                                                     gAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCTCTTGATGCCCGCTCGCAGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGt                                                              >  7:261417/1‑149 (MQ=255)                                                                                     gAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGt                                                              >  2:245302/1‑149 (MQ=255)                                                                                       aaaaGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTCGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGtt                                                             <  6:4571/148‑1 (MQ=255)                                                                                              cgcgGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCt                                                     <  3:105970/149‑1 (MQ=255)                                                                                                   tCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCTGCCGAGCGGCa                                                                                                                 <  3:373836/84‑1 (MQ=255)                                                                                                   tCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCTGCCGAGCGGCa                                                                                                                 >  4:373836/1‑84 (MQ=255)                                                                                                             cAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGc                                                                                                                  <  2:172075/73‑1 (MQ=255)                                                                                                             cAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGc                                                                                                                  >  1:172075/1‑73 (MQ=255)                                                                                                             cAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAggtgatgggtgatg                                                                  <  2:133387/121‑1 (MQ=255)                                                                                                             cAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAggtgatgggtgatg                                                                  >  1:133387/1‑121 (MQ=255)                                                                                                               gtgtGCCGATGTCGGCCTGGATGGCCCGTTTCTCTTCGCTTGATGCCCGCTCGCTGAACGAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCAtttag                                    <  8:83112/149‑3 (MQ=255)                                                                                                                  tgCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCctgatgcaagtgccgctcggctggttcagcgagcgggcatcaa                                                                                                       >  2:388831‑M1/1‑36 (MQ=255)                                                                                                                  tgCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCctgatgcaagtgccgctcggctggttcagcgagcgggcatcaa                                                                                                       <  1:388831‑M1/79‑44 (MQ=255)                                                                                                                     cGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCg                              >  6:224357/1‑149 (MQ=255)                                                                                                                                 gCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCTCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTc                  <  8:261417/149‑1 (MQ=255)                                                                                                                                      gCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCAt                >  4:304996/1‑146 (MQ=255)                                                                                                                                      gCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCAt                <  3:304996/146‑1 (MQ=255)                                                                                                                                      gCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGc              <  5:224357/148‑1 (MQ=255)                                                                                                                                       cccGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGCCa            <  5:237540/149‑1 (MQ=255)                                                                                                                                        ccGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAgg                     >  5:40530/1‑139 (MQ=255)                                                                                                                                        ccGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAgg                     <  6:40530/139‑1 (MQ=255)                                                                                                                                           tttCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGgcgaagtgaaacgggccacgcaggacgacatcggcacactgcacagcctgaccgcgcactttttcaccacactgggccgcaccgtgggcgccgtg        <  6:177729‑M2/149‑96 (MQ=255)                                                                                                                                           tttCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGCCAGTGa        <  4:30379/149‑1 (MQ=255)                                                                                                                                               aCTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCAt                >  7:196354/1‑137 (MQ=255)                                                                                                                                               aCTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCAt                <  8:196354/137‑1 (MQ=255)                                                                                                                                               aCTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGCCAGTGAACAg    >  6:169697/1‑149 (MQ=255)                                                                                                                                                 ttCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGCCAGTGAACAGGc  >  7:91250/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CACGACCACGGCAAGGCGCCAGTCCATGGCGAACAGGTAGGCCACGGAAATCAGCACGGCGCCCACGGTGCGGCCCAGTGTGGTGAAAAAGTGCGCGGTCAGGCTGTGCAGTGTGCCGATGTCGTCCTGCATGGCCCGTTTCACTTCGCTTGATGCCCGCTCGCTGAACCAGCCGAGCGGCACTTGCATCAGGCGCTGGCCGATCGCCACGCGCAGGTGATGGGTGATGTGGTTGTCGGCCTGGTGCGCCAGCATTTCGGCTGCGGTGATCAGGGTCATGCCAGTGAACAGGC  >  NC_002947/2967880‑2968172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.