New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3512801 =	57 (0.890)	6 (0.100)	3/242	NT	10.4%	coding (1469/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	3512837 =	49 (0.800)					coding (1505/4158 nt)	PP_3108	rhs family protein

CCGACGGCCTGATGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATGGTTGGCCTGACCTTGC  >  NC_002947/3512654‑3512944                                                                                                                                                    |                                                                                                                                                 ccGACGGCCTGATGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGCCGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCAcc                                                                                                                                                 >  3:200877/1‑149 (MQ=255) agaattcgtcgtacttgaattgcaggcggttaccgtccggcaaggtcaggccaaccatattgccgtgttcgtccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttcc                                                                                                                                                 >  2:12579‑M1/148‑149 (MQ=255)     ttcgtcgtacttgaattgcaggcggttaccgtccggcaaggtcaggccaaccatattgccgtgttcgtccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCt                                                                                                                                             <  7:80762‑M1/6‑1 (MQ=255)         cTGATGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGc                                                                                                                                         >  2:96312/1‑149 (MQ=255)           gATGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCa                                                                                                                                       >  6:396044/1‑149 (MQ=255)            tacttgaattgcaggcggttaccgtccggcaaggtcaggccaaccatattgccgtgttcgtccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCTGGGCCAc                                                                                                                                      <  6:111234‑M1/13‑1 (MQ=255)            aTGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCAc                                                                                                                                      >  1:152645/1‑149 (MQ=255)                  aCCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGt                                                                                                                                <  5:396044/149‑1 (MQ=255)                         gCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGc                                                                                                                         <  6:187988/149‑1 (MQ=255)                                  cgtccggcaaggtcaggccaaccatattgccgtgttcgtccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTg                                                                                                                >  5:111234‑M1/115‑149 (MQ=255)                                    gggctgggctGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGa                                                                                                              <  1:163444/149‑1 (MQ=255)                                      gctgggctgCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAg                                                                                                            <  8:22503/149‑1 (MQ=255)                                      gctgggctgCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAg                                                                                                            >  7:22503/1‑149 (MQ=255)                                      cggcaaggtcaggccaaccatattgccgtgttcgtccagctcgatggcgtaacgctcgccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCTGGGCCACCGACGTACTTGGCCGCGAGCTGGaa                                                                                                             >  4:312390‑M1/111‑148 (MQ=255)                                      cggcaaggtcaggccaaccatattgccgtgttcatccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGaa                                                                                                             >  6:220590‑M1/111‑148 (MQ=255)                                          ggctgCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTg                                                                                                          >  1:188858/1‑147 (MQ=255)                                                cACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGAc                                                                                                                                  >  6:109264/1‑117 (MQ=255)                                                cACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGAc                                                                                                                                  <  5:109264/117‑1 (MQ=255)                                                 aCTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑c                                                                                                >  5:281574/1‑149 (MQ=255)                                                   tACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGAc                                                                                                                                  <  5:51589/114‑1 (MQ=255)                                                   tACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGAc                                                                                                                                  >  6:51589/1‑114 (MQ=255)                                                    caaccatattgccgtgttcgtccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttc                                                                                                                                                  <  7:65307‑M1/1‑1 (MQ=255)                                                    caaccatattgccgtgttcgtccagctcgatggcgtaacgctccccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttc                                                                                                                                                  >  8:65307‑M1/97‑97 (MQ=255)                                                      cGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGATCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTg                                                                                                                >  3:59312/1‑129 (MQ=255)                                                      cGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGATCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTg                                                                                                                <  4:59312/129‑1 (MQ=255)                                                             aaaCCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACcgc                                                                                    >  1:90656/1‑149 (MQ=255)                                                                   tGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGaccac                                                                                       >  4:30699/1‑140 (MQ=255)                                                                   tGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGaccac                                                                                       <  3:30699/140‑1 (MQ=255)                                                                      gCGAGAAGCCACGCGTGGTCGAACACTGGACGAGCGACGGCGAGGACTACCTCTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACGGACGTGCTCGGCCGCGAGCTGGAAGTGGAGTACAA‑CGCCGACCACGCGGTGGTCggc                                                                           <  4:200877/149‑3 (MQ=21)                                                                      gCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGc                                                                            >  3:157457/1‑148 (MQ=255)                                                                       cGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGt                                                                                                      >  4:10086/1‑122 (MQ=255)                                                                       cGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGt                                                                                                      <  3:10086/122‑1 (MQ=255)                                                                           aaGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGAc                                                                                                                                  <  8:266966/90‑1 (MQ=255)                                                                           aaGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGc                                                                                              <  5:147772/125‑1 (MQ=255)                                                                           aaGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGc                                                                                              >  6:147772/1‑125 (MQ=255)                                                                             gCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCcgc                                                                     >  6:234696/1‑148 (MQ=255)                                                                              ccACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGa                                                                   <  2:188858/149‑1 (MQ=255)                                                                                aCGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTc                                                                              <  5:384993/136‑1 (MQ=255)                                                                                aCGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGAt                                                                  >  7:213910/1‑148 (MQ=255)                                                                                aCGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGATACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTc                                                                              >  6:384993/1‑136 (MQ=255)                                                                                       gTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCg                                                           <  5:234696/148‑1 (MQ=255)                                                                                         acgctcgccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCTGGGCCACCGACGTACTTGGCCGCGAGCTGGAAGt                                                                                                           <  5:313969‑M1/40‑1 (MQ=255)                                                                                         acgctcgccgccataatcgcggctggcgaccacgcggtggtcggcgttgtactgcacttCCAGCTGGGCCACCGACGTACTTGGCCGCGAGCTGGAAGt                                                                                                           >  6:313969‑M1/60‑99 (MQ=255)                                                                                          gAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCggg                                                         >  7:39/1‑147 (MQ=255)                                                                                          gAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCT‑GGCCACCGACGTGCTCGGCCGCGAGCt                                                                                                                 <  7:371461/91‑1 (MQ=255)                                                                                          gAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCT‑GGCCACCGACGTGCTCGGCCGCGAGCt                                                                                                                 >  8:371461/1‑91 (MQ=255)                                                                                                  gACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAACCGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTAc                                                <  1:96312/149‑1 (MQ=255)                                                                                                  gACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCTGGGAGCGTTAc                                                <  6:296144/148‑1 (MQ=255)                                                                                                       gCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATc                                          <  2:202629/149‑1 (MQ=255)                                                                                                       gCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATc                                          >  1:202629/1‑149 (MQ=255)                                                                                                        ggACGGAGAGCACTACCTCTTCCGCTACGACCTCGATAGCCGCACCAGCTGTGCCACCGACGTGGTCGGCCGCGATCTTGAAGTGCAGTACAT‑CGCCGACCACCGCGTTGTCGCGTGACGCGATTATGGAGGGGAGCTTTACGCAATc                                          <  8:213910/147‑1 (MQ=255)                                                                                                         gACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGa                                        <  8:39/149‑1 (MQ=255)                                                                                                               gAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACcgc                                                                                    >  8:63996/1‑99 (MQ=255)                                                                                                               gAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACcgc                                                                                    <  7:63996/99‑1 (MQ=255)                                                                                                                aGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGAc                                 <  2:90656/149‑1 (MQ=255)                                                                                                                     tACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGAc                                 >  6:41723/1‑144 (MQ=255)                                                                                                                     tACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGAc                                 <  5:41723/144‑1 (MQ=255)                                                                                                                     tACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAaca                            >  8:276267/1‑149 (MQ=255)                                                                                                                     tACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAaca                            >  3:302767/1‑149 (MQ=255)                                                                                                                       ccACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATc                                          <  6:153403/133‑1 (MQ=255)                                                                                                                       ccACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATc                                          >  5:153403/1‑133 (MQ=255)                                                                                                                               gCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCTCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATg                  >  8:261651/1‑149 (MQ=255)                                                                                                                               gCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATg                  >  7:82001/1‑149 (MQ=255)                                                                                                                                     cccTCGCCAGCCCCACCAGCTGGGCCCCCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATGGTTGGc            <  4:302767/148‑1 (MQ=255)                                                                                                                                       cTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGAt                                                                  <  4:190828/93‑1 (MQ=40)                                                                                                                                       cTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGAt                                                                  >  3:190828/1‑93 (MQ=40)                                                                                                                                          gATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATGGTTGGCCTGAc       <  7:276267/149‑1 (MQ=37)                                                                                                                                           aTAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATGGTTGGCCTGAcc      >  8:80762/1‑149 (MQ=37)                                                                                                                                               ccGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATGGTTGGCCTGACCTTGc  <  8:82001/149‑1 (MQ=37)                                                                                                                                                   aCCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAg                                       >  4:407975/1‑108 (MQ=40)                                                                                                                                                   aCCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAg                                       <  3:407975/108‑1 (MQ=40)                                                                                                                                                    |                                                                                                                                                 CCGACGGCCTGATGGTGACCCACAGCAACGCGCTGGGGCTGGGCTGCCACTACCGTTGGCAAACCCTGGGCGACAAGCCACGCGTGGTCGAACACTGGACCAGCGACGGCGAGCACTACCACTTCCGCTACGACCTCGATAGCCGCACCAGCTGGGCCACCGACGTGCTCGGCCGCGAGCTGGAAGTGCAGTACAA‑CGCCGACCACCGCGTGGTCGCCAGCCGCGATTATGGCGGGGAGCGTTACGCCATCGAGCTGGACGAACACGGCAATATGGTTGGCCTGACCTTGC  >  NC_002947/3512654‑3512944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.