New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3566966 =	60 (0.940)	3 (0.050)	3/240	NT	5.6%	coding (569/1050 nt)	PP_3149	AraC family transcriptional regulator
	?	NC_002947	3567047 =	44 (0.730)					coding (650/1050 nt)	PP_3149	AraC family transcriptional regulator

GCAATATCTGGATCACGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGG  >  NC_002947/3566822‑3567114                                                                                                                                                  |                                                                                                                                                     gCAATATCTGGATCACGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGc                                                                                                                                                  >  4:215428/1‑149 (MQ=255)   aagcaggttcagcgtctcttccgggcagtcggccgcccattcgctgacccggtgcatgatcgccctttcctcgtcccgccgccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCt                                                                                                                                                 <  4:129396‑M1/6‑1 (MQ=255)      atCTGGATCACGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCt                                                                                                                                             >  4:60998/1‑149 (MQ=255)         tGGATCACGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAg                                                                                                                                          >  3:397219/1‑149 (MQ=255)           gATCACGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCa                                                                                                                                           <  2:408432/146‑1 (MQ=255)               aCGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCAc                                                                                                                                    <  4:397219/149‑1 (MQ=255)                   cGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCtt                                                                                                                                 >  1:240713/1‑148 (MQ=255)                            aCCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGCCCCGCAATAGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGtt                                                                                                                        >  1:121573/1‑149 (MQ=255)                            aCCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGCAAACGCCTGGAAGGGTTGTTCATGGTGACACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGtt                                                                                                                        >  1:116669/1‑149 (MQ=255)                             ccAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTgg                                                                                                                      >  4:11562/1‑149 (MQ=255)                                  gccgcccattcgctgacccggtgcatgatcgccctttcctcgtccagccgccccagggcgacggcctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccagcagc                                                                                                                                                  >  2:226213‑M1/113‑117 (MQ=255)                                  gccgcccattcgctgacccggtgcatgatcgcacttaccacgtcccgcccccccacggccacgccctgcaaacgctggctggcgttgtcgagaatgaacagccagtcctccagcagc                                                                                                                                                  <  1:226213‑M1/5‑1 (MQ=255)                                  aggGGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCgag                                                                                                                 <  3:110594/149‑1 (MQ=255)                                      ggCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGaggagg                                                                                                             >  2:133483/1‑149 (MQ=255)                                           tCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGc                                                                                                        >  6:97538/1‑149 (MQ=255)                                             gtgtTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGccc                                                                                                      <  2:253339/149‑1 (MQ=255)                                             gtgtTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGcc                                                                                                       <  2:240713/148‑1 (MQ=255)                                               gtTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGATGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGt                                                                                                    >  5:109551/1‑149 (MQ=255)                                                   gACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGc                                                                                                 >  7:240303/1‑148 (MQ=255)                                                    aCCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCaa                                                                                               <  6:84291/149‑1 (MQ=255)                                                    aCCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGGTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCaa                                                                                               <  3:60998/149‑1 (MQ=255)                                                      cAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAgg                                                                                             >  1:123352/1‑149 (MQ=255)                                                      cAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAgg                                                                                             <  3:215428/149‑1 (MQ=255)                                                         gCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTTGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAg                                                                                                                                          <  5:54218/101‑1 (MQ=255)                                                         gCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAg                                                                                                                                          >  6:54218/1‑101 (MQ=255)                                                           cTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAggg                                                                                            >  8:124808/1‑145 (MQ=255)                                                           cTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAggg                                                                                            <  7:124808/145‑1 (MQ=255)                                                                tGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTg                                                                                   <  6:296754/149‑1 (MQ=255)                                                                  gCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTgg                                                                                  <  8:15747/148‑1 (MQ=255)                                                                  gCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTgg                                                                                  <  3:11562/148‑1 (MQ=255)                                                                  gCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTg                                                                                   <  2:123352/147‑1 (MQ=255)                                                                  gCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGc                                                                                 >  2:386275/1‑149 (MQ=255)                                                                  gCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGc                                                                                 >  2:126049/1‑149 (MQ=255)                                                                            gCCTGGACCCGC‑AGCGCCCGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCTCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAgctg                                                                       >  4:72325/1‑149 (MQ=255)                                                                             ccTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAgctgc                                                                      >  7:214576/1‑149 (MQ=255)                                                                              cTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAgctgct                                                                     >  4:375206/1‑149 (MQ=255)                                                                                 gACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGctgctg                                                                    <  8:214576/147‑1 (MQ=255)                                                                                  cgccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTgga                                                                  >  5:164960‑M1/65‑149 (MQ=255)                                                                                  aCCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTtgag                                                                 >  3:253341/1‑149 (MQ=255)                                                                                   gccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAgctgct                                                                     >  5:368385‑M1/64‑145 (MQ=255)                                                                                   gccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAgctgct                                                                     <  6:368385‑M1/82‑1 (MQ=255)                                                                                      gC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGtt                                                                                                   <  2:257677/111‑1 (MQ=255)                                                                                      gC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGtt                                                                                                   >  1:257677/1‑111 (MQ=255)                                                                                         aGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGc                                                           <  1:126049/149‑1 (MQ=255)                                                                                          gcgcCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTACTGGAGGACTGcc                                                          >  1:345685/1‑149 (MQ=255)                                                                                               tGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGtt                                                      >  8:53966/1‑148 (MQ=255)                                                                                                 gAAGGGTTGTTCCTGGCGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGTCGAGGAGGGTTGCCCGTTGCAATGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCa                                                    <  5:291262/148‑1 (MQ=255)                                                                                                     ggTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATtctc                                               <  5:394460/149‑1 (MQ=255)                                                                                                         gttCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGAc                                            <  1:133483/148‑1 (MQ=255)                                                                                                            cATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACg                                        >  2:91912/1‑149 (MQ=255)                                                                                                             aTGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACgc                                       >  6:59780/1‑149 (MQ=255)                                                                                                              tGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACgcc                                      >  1:370500/1‑149 (MQ=255)                                                                                                                   ccACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACgccagc                                   >  2:234484/1‑147 (MQ=255)                                                                                                                    cACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCt                                                                                    >  6:409883/1‑97 (MQ=255)                                                                                                                    cACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCt                                                                                    <  5:409883/97‑1 (MQ=255)                                                                                                                            aGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCa                        <  1:234484/149‑1 (MQ=255)                                                                                                                                gCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGc                    <  2:116669/149‑1 (MQ=255)                                                                                                                                gCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGc                    <  2:121573/149‑1 (MQ=255)                                                                                                                                 ccAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCg                   <  8:240303/149‑1 (MQ=255)                                                                                                                                  cAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTgga                                                                  <  3:146831/101‑1 (MQ=255)                                                                                                                                  cAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTgga                                                                  >  4:146831/1‑101 (MQ=255)                                                                                                                                  cAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGt                  >  1:392777/1‑149 (MQ=255)                                                                                                                                         ctcTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCt            <  3:72325/146‑1 (MQ=255)                                                                                                                                          gcTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTgg          <  7:53966/149‑1 (MQ=255)                                                                                                                                           cTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTggg         >  2:86144/1‑149 (MQ=255)                                                                                                                                           cTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTggg         <  3:375206/149‑1 (MQ=255)                                                                                                                                           cTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTggg         <  1:386275/149‑1 (MQ=255)                                                                                                                                              ttCGGCAGCTGGCTCAGCGCCAGAATGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGAAGCTGCTGGAGGACTGCCTGTTAATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTgggg        >  7:61318/1‑147 (MQ=255)                                                                                                                                              ttCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTgggg        <  8:61318/147‑1 (MQ=255)                                                                                                                                                 ggCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGgcggcg   >  2:312127/1‑149 (MQ=255)                                                                                                                                                  GCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGcggcgg  <  6:152634‑M1/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCAATATCTGGATCACGCCGGAGAACTACCAGGAGGTGGCGGTCGTGTTCGACCAGGCCTTTCTGGCCCGCCATGGCCTGGACCCGC‑AGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGG  >  NC_002947/3566822‑3567114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.