New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3566966 =	60 (0.940)	3 (0.050)	3/240	NT	5.6%	coding (569/1050 nt)	PP_3149	AraC family transcriptional regulator
	?	NC_002947	3567047 =	44 (0.730)					coding (650/1050 nt)	PP_3149	AraC family transcriptional regulator

CTGGACCCGCAGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCTGCTT  >  NC_002947/3566899‑3567189                                                                                                                                                      |                                                                                                                                               cTGGACCCGCAGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAgctgct                                                                                                                                                >  4:375206/1‑149 (MQ=255)    gACCCGCAGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGctgctg                                                                                                                                               <  8:214576/147‑1 (MQ=255)    cgccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTgga                                                                                                                                             >  5:164960‑M1/65‑149 (MQ=255)     gccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAgctgct                                                                                                                                                >  5:368385‑M1/64‑145 (MQ=255)     gccccagggccacgccctgcaaacgctggctggcgttgtcgagaatgaacaggcagtcctccaGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAgctgct                                                                                                                                                <  6:368385‑M1/82‑1 (MQ=255)     aCCCGCAGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTtgag                                                                                                                                            >  3:253341/1‑149 (MQ=255)           aGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGc                                                                                                                                      <  1:126049/149‑1 (MQ=255)            gcgcCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTACTGGAGGACTGcc                                                                                                                                     >  1:345685/1‑149 (MQ=255)                 tGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGtt                                                                                                                                 >  8:53966/1‑148 (MQ=255)                   gAAGGGTTGTTCCTGGCGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGTCGAGGAGGGTTGCCCGTTGCAATGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCa                                                                                                                               <  5:291262/148‑1 (MQ=255)                       ggTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATtctc                                                                                                                          <  5:394460/149‑1 (MQ=255)                           gttCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGAc                                                                                                                       <  1:133483/148‑1 (MQ=255)                              cATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACg                                                                                                                   >  2:91912/1‑149 (MQ=255)                               aTGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACgc                                                                                                                  >  6:59780/1‑149 (MQ=255)                                tGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACgcc                                                                                                                 >  1:370500/1‑149 (MQ=255)                                     ccACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACgccagc                                                                                                              >  2:234484/1‑147 (MQ=255)                                              aGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCa                                                                                                   <  1:234484/149‑1 (MQ=255)                                                  gCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGc                                                                                               <  2:121573/149‑1 (MQ=255)                                                  gCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGc                                                                                               <  2:116669/149‑1 (MQ=255)                                                   ccAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCg                                                                                              <  8:240303/149‑1 (MQ=255)                                                    cAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTgga                                                                                                                                             <  3:146831/101‑1 (MQ=255)                                                    cAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTgga                                                                                                                                             >  4:146831/1‑101 (MQ=255)                                                    cAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGt                                                                                             >  1:392777/1‑149 (MQ=255)                                                           ctcTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCt                                                                                       <  3:72325/146‑1 (MQ=255)                                                            gcTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTgg                                                                                     <  7:53966/149‑1 (MQ=255)                                                             cTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTggg                                                                                    >  2:86144/1‑149 (MQ=255)                                                             cTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTggg                                                                                    <  1:386275/149‑1 (MQ=255)                                                             cTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTggg                                                                                    <  3:375206/149‑1 (MQ=255)                                                                ttCGGCAGCTGGCTCAGCGCCAGAATGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGAAGCTGCTGGAGGACTGCCTGTTAATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTgggg                                                                                   >  7:61318/1‑147 (MQ=255)                                                                ttCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTgggg                                                                                   <  8:61318/147‑1 (MQ=255)                                                                 tccagcagctgctcagccagggcctgcccttgcaacgggcaaccctcctcgcccaaccgggtcaaggtggcgctgagccagctgcTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGggcg                                                                                 >  5:164960‑M2/86‑149 (MQ=255)                                                                   ggCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGgcggcg                                                                              >  2:312127/1‑149 (MQ=255)                                                                    agcagctgctcagccagggcctgcccttgcaacgggcaaccctcctcgcccaaccgggtcaaggtggcgctgagccagctgcTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGggc                                                                                  <  6:368385‑M2/63‑1 (MQ=255)                                                                    agcagctgctcagccagggcctgcccttgcaacgggcaaccctcctcgcccaaccgggtcaaggtggcgctgagccagctgcTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGggc                                                                                  >  5:368385‑M2/83‑145 (MQ=255)                                                                    GCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGcggcgg                                                                             <  6:152634‑M1/149‑1 (MQ=255)                                                                      AGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGa                                                                           <  5:126658‑M1/149‑1 (MQ=255)                                                                       GCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGAc                                                                          >  5:59780‑M1/1‑149 (MQ=255)                                                                           gCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAg                                                                       <  6:109551/148‑1 (MQ=255)                                                                                  gcCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGc                                                               <  8:12317/149‑1 (MQ=255)                                                                                     aCCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCAGGGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGa                                                             >  1:296962/1‑149 (MQ=255)                                                                                      ccTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATc                                                           <  6:126658/149‑1 (MQ=255)                                                                                          gACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTTAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCAt                                                         <  5:416578/147‑1 (MQ=255)                                                                                            cccGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCAc                                                     <  1:86144/149‑1 (MQ=255)                                                                                               ggTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCgg                                                  >  3:285494/1‑149 (MQ=255)                                                                                                 ttGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGt                                                <  2:392777/149‑1 (MQ=255)                                                                                                    ggCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAg                                             >  6:176153/1‑149 (MQ=255)                                                                                                       gaggagGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCg                                           >  8:241807/1‑148 (MQ=255)                                                                                                             ggTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGggc                                    <  1:312127/149‑1 (MQ=255)                                                                                                                  cccGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGcc                                <  1:91912/148‑1 (MQ=255)                                                                                                                  cccGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGcc                                >  4:232366/1‑148 (MQ=255)                                                                                                                     gTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGc                                                               <  6:409375/114‑1 (MQ=255)                                                                                                                     gTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGc                                                               >  5:409375/1‑114 (MQ=255)                                                                                                                          aaGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGaaa                                                                   >  7:373340/1‑105 (MQ=255)                                                                                                                          aaGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGaaa                                                                   <  8:373340/105‑1 (MQ=255)                                                                                                                          aaGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCg                       >  3:129396/1‑149 (MQ=255)                                                                                                                                  ggCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAgaga                <  5:97538/149‑1 (MQ=255)                                                                                                                                     ccTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGggcg                                   >  7:228206/1‑127 (MQ=255)                                                                                                                                     ccTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGggcg                                   <  8:228206/127‑1 (MQ=255)                                                                                                                                             agcagcTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCt      <  3:232366/148‑1 (MQ=255)                                                                                                                                             agcagcTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCt      <  5:152634/148‑1 (MQ=255)                                                                                                                                              gcagcTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCTGc    <  2:345685/149‑1 (MQ=255)                                                                                                                                              gcagcTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCTGc    >  5:66122/1‑149 (MQ=255)                                                                                                                                                agctgcTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCTGCtt  <  4:129396‑M2/143‑1 (MQ=255)                                                                                                                                                 gctgcTGGAGGACTGGCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCGTGGGGGGGCGGGACGTGGTAAGTGCGATCATGCACCGGGTCAGCGAATGggcggc                                 <  1:226213‑M2/112‑1 (MQ=255)                                                                                                                                                 gctgcTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGCCGTCGCCCTGGGGCGGCTGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGggcggc                                 >  2:226213‑M2/6‑117 (MQ=255)                                                                                                                                                      |                                                                                                                                               CTGGACCCGCAGCGCCTGGAAGGGTTGTTCATGGTGCCACTGGGCAGCGGCCAGAATGCGCTGTTCGGCAGCTGGCTCAGCGCCACCTTGACCCGGTTGGGCGAGGAGGGTTGCCCGTTGCAAGGGCA‑GGCCCTGGCTGAGCAGCTGCTGGAGGACTGCCTGTTCATTCTCGACAACGCCAGCCAGCGTTTGCAGGGCGTGGCCCTGGGGCGGCGGGACGAGGAAAGGGCGATCATGCACCGGGTCAGCGAATGGGCGGCCGACTGCCCGGAAGAGACGCTGAACCTGCTT  >  NC_002947/3566899‑3567189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.