New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4893553 =	54 (0.840)	3 (0.060)	3/200	NT	8.8%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4893632 =	20 (0.400)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter

CTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGC  >  NC_002947/4893406‑4893697                                                                                                                                                      |                                                                                                                                                 cTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTc                                                                                                                                                 <  8:156094/149‑1 (MQ=255)  tGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTcg                                                                                                                                                >  8:233736/1‑149 (MQ=255)   ccgtggcccaggcgggtcacgggttgacgaattttttggggtacatggggcagtcagtggaggtggcggggggcgcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTc                                                                                                                                                 >  8:388605‑M1/148‑149 (MQ=255)    gagaTTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTcgc                                                                                                                                               <  4:321139/148‑1 (MQ=255)    gagaTTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTcgc                                                                                                                                               <  1:201277/148‑1 (MQ=255)     gtggcccagtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTcgc                                                                                                                                               >  3:87913‑M1/146‑149 (MQ=255)      gaTTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGa                                                                                                                                             >  1:82123/1‑148 (MQ=255)       aTTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGaca                                                                                                                                           <  6:264018/149‑1 (MQ=255)          ccagtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGaca                                                                                                                                           <  7:283216‑M1/8‑1 (MQ=255)          ccagtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggtttcccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGaca                                                                                                                                           <  3:267108‑M1/8‑1 (MQ=255)           cagtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGacac                                                                                                                                          <  5:126100‑M1/9‑1 (MQ=255)            ccAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAgg                                                                                                                                      >  2:250856/1‑149 (MQ=255)             cAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGc                                                                                                                                     >  3:333319/1‑149 (MQ=255)              aGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGcc                                                                                                                                    <  8:44684/149‑1 (MQ=255)              aGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGcc                                                                                                                                    >  3:292389/1‑149 (MQ=255)                ggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGcc                                                                                                                                    <  2:26844‑M1/15‑1 (MQ=255)                 gggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCg                                                                                                                                   <  4:186574‑M1/16‑1 (MQ=255)                 gggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCg                                                                                                                                   >  5:51229‑M1/134‑149 (MQ=255)                  gcAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTc                                                                                                                                <  2:184587/149‑1 (MQ=255)                   cAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTcc                                                                                                                               <  1:166266/149‑1 (MQ=255)                       gCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTcgc                                                                                                                                               <  2:396160/129‑1 (MQ=255)                       gCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTcgc                                                                                                                                               >  1:396160/1‑129 (MQ=255)                        ggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCcac                                                                                                                            >  1:364840‑M1/127‑149 (MQ=255)                         aTGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGCGGCCCCTTTCGCGACACAAGGCCGCTCCCACAg                                                                                                                          <  1:250856/149‑1 (MQ=255)                             ccAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCa                                                                                                                     <  5:355001/149‑1 (MQ=255)                             ccAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCa                                                                                                                     <  1:279659/149‑1 (MQ=255)                              cAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCAc                                                                                                                    <  4:25063/149‑1 (MQ=255)                                    tGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGc                                                                                                              <  4:333319/149‑1 (MQ=255)                                      gCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGcac                                                                                                            <  4:292389/149‑1 (MQ=255)                                        gACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGcac                                                                                                            >  3:378508/1‑147 (MQ=255)                                        gACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACaa                                                                                                          <  1:175294/149‑1 (MQ=255)                                          cacGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAgg                                                                                                        <  5:254858/149‑1 (MQ=255)                                            cGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGa                                                                                                      <  2:357270/149‑1 (MQ=255)                                             gctgctGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGaa                                                                                                     >  1:26844/1‑149 (MQ=255)                                                 ctgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCa                                                                                                 <  4:373919/149‑1 (MQ=255)                                                 ctgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCa                                                                                                 <  3:95977/149‑1 (MQ=255)                                                     tCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCCCAACCACAAGGCCCACCAGGCACAAGGGAATGGAggac                                                                                             >  4:232204/1‑146 (MQ=38)                                                      cACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                   <  5:236423/142‑1 (MQ=255)                                                      cACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                   >  6:236423/1‑142 (MQ=255)                                                        ccGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCCCGCTGGCACAAGGGAATGCAGTCCCtg                                                                                          >  7:167064/1‑149 (MQ=255)                                                         cGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAAt                                                                                                    <  5:114600/138‑1 (MQ=255)                                                         cGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAAt                                                                                                    >  6:114600/1‑138 (MQ=255)                                                          agtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAg                                                                                                                          <  2:335831‑M1/25‑1 (MQ=255)                                                          agtggaggttgatgggggagccgtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAg                                                                                                                          >  1:335831‑M1/93‑117 (MQ=255)                                                           cTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGGCACAAGGCCGCTCCCACCGGGCCCCGCTGGCACAAGGGAATGGCGTCCCGGTgg                                                                                       >  3:367145/1‑149 (MQ=255)                                                           cTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTgg                                                                                       <  5:187455/149‑1 (MQ=255)                                                            tGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGGCACCAGGCCGCTCCCACCGGGCCCCGCGGGCACAAGGGCAGGCAGGGCCTGgggg                                                                                      >  5:251635/1‑149 (MQ=255)                                                                  gccgaaaggCACGCCAGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGc                                                                                >  3:100730/8‑149 (MQ=255)                                                                            aaGCCGGGTAAGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGCCACAAGGCCCCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTcgc                                                                      >  6:126100/1‑149 (MQ=255)                                                                                cGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGAtt                                                                  <  4:378508/149‑1 (MQ=255)                                                                                        aCTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                   <  3:272299/108‑1 (MQ=255)                                                                                        aCTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATg                                                                                                   >  4:272299/1‑108 (MQ=255)                                                                                          tAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCaaa                                                        <  8:167064/149‑1 (MQ=255)                                                                                           aaCACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCtt                                                                             <  5:143348/127‑1 (MQ=255)                                                                                           aaCACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCtt                                                                             >  6:143348/1‑127 (MQ=255)                                                                                            acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGc                                                      >  4:321133/1‑149 (MQ=255)                                                                                            acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAAAGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGc                                                      >  8:72454/1‑149 (MQ=255)                                                                                             cacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTACCACAGGGCCACGCTGGCACAAGGGAATGCAGTACCTGTGGGGGCGGCCTGGTGTCGCGATTGGAGGGCAAAGcc                                                     >  5:136944/1‑149 (MQ=255)                                                                                                gCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGccctc                                                  >  5:412997/1‑149 (MQ=255)                                                                                                 tcggttttccgcggtcgggtagagcgttattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGa                                                                                     >  8:238323‑M1/54‑115 (MQ=255)                                                                                                        tCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAAGCCCCAACCACACGGCCCCCCAGGCCAAAAGGAATTCAATGCCAATGGGGGCCGCCATGTGTAGCGCATTGAGGGCAAAACCCACCCCGaaa                                           >  4:405535/1‑147 (MQ=255)                                                                                                           ataCTTTTATCTGTGATTGCCGGGGGCG‑GTTTAC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGTAATGCAGTCCCTGTGGGTGGGGCCTTGTGTCGCGATTGGa                                                               <  6:239072/123‑1 (MQ=37)                                                                                                           agaCTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGTAGTCCCTGTGGGAGCGGCCTTGTGACGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                       <  6:310150/149‑1 (MQ=255)                                                                                                           agaCTTTGATCTGAGATTGCCGGGGGCG‑CGTTAC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGTATTCAGTGCCTGTGGGAGCGGCCGTGTGTGGCGCTTggt                                                               >  5:239072/1‑124 (MQ=37)                                                                                                           agaCTTTGATCTAAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACaa                                                                                                          >  2:294369/1‑82 (MQ=255)                                                                                                           agaCTTTGATCTAAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACaa                                                                                                          <  1:294369/82‑1 (MQ=255)                                                                                                              cTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACCCACGCACAAGGGAATTCAGTCCCTGTGGGAGCGGCATTGTGTAGCGATTGGACGGCAAATCCCTCCCTGAATACCGca                                     >  2:60976/1‑147 (MQ=38)                                                                                                               tttGATCTGAGATTGCCGGGGGCGTCGTTGC‑GCCCCTTTCGCGACACAAGGCCCATCCCCAAGGGCCACGCTGGCACAAGGGAATGCAGGCCCtgt                                                                                         >  7:257296/1‑96 (MQ=37)                                                                                                               tttGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCtgt                                                                                         <  8:257296/95‑1 (MQ=255)                                                                                                               tcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCg                                                                                  >  7:71895‑M1/40‑104 (MQ=255)                                                                                                               tcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCg                                                                                  <  8:71895‑M1/65‑1 (MQ=255)                                                                                                                             gCCGGGGGCG‑CGTTGC‑GCCCCTTGCGCGACACAAGGCCGCTCCCACAGGGCCACGCGGGCACAAGGCAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGa                      <  4:367145/148‑1 (MQ=255)                                                                                                                                             c‑gcCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCaaa       <  5:117085/148‑1 (MQ=255)                                                                                                                                                ccccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAagag    <  6:412997/149‑1 (MQ=255)                                                                                                                                                 cccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGcc                                                                               <  4:104801/73‑1 (MQ=255)                                                                                                                                                  ccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGc  <  7:72454/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                 CTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCG‑CGTTGC‑GCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGC  >  NC_002947/4893406‑4893697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.