New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5519195	69 (1.080)	4 (0.070)	4/244	NT	6.2%	coding (535/789 nt)	PP_4852	AraC family transcriptional regulator
	?	NC_002947	= 5519293	55 (0.890)					coding (437/789 nt)	PP_4852	AraC family transcriptional regulator

AATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGT  >  NC_002947/5519049‑5519341                                                                                                                                                   |                                                                                                                                                   aaTGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGt                                                                                                                                                  >  5:224032/1‑149 (MQ=255)  aTGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTc                                                                                                                                                 <  6:224032/149‑1 (MQ=255)      ccTGAATCGGCAGGCCGGCCTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGc                                                                                                                                              >  4:291149/1‑148 (MQ=255)        tGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAg                                                                                                                                           >  6:52627/1‑149 (MQ=255)               gCAGGCCGGCTTGCAGCGCTTTGATGGCACGCAGAAAACGCAGGCGCAGGCGCGATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAgcgggcgg                                                                                                                                    <  7:141476/149‑1 (MQ=255)               gCAGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTTGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAgcgggcgg                                                                                                                                    <  3:29073/149‑1 (MQ=255)                 aGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGtt                                                                                                                                  <  6:349311/149‑1 (MQ=255)                   gCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGt                                                                                                                                <  2:221759/149‑1 (MQ=255)                    ccGGCCTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTc                                                                                                                               <  3:291149/149‑1 (MQ=255)                     cgatctCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTc                                                                                                                               <  5:131979/143‑1 (MQ=255)                     cGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCA                                                                                                                                                    <  1:126230‑M1/127‑1 (MQ=255)                     cGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCA                                                                                                                                                    >  2:126230‑M1/1‑127 (MQ=255)                            cAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTc                                                                                                                               >  6:131979/1‑141 (MQ=255)                             aGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTc                                                                                                                      >  4:210685/1‑149 (MQ=255)                              gcgcTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCgg                                                                                                                                               >  5:210968/1‑123 (MQ=255)                              gcgcTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCgg                                                                                                                                               <  6:210968/123‑1 (MQ=255)                                gcTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGgc                                                                                                                   <  8:125057/149‑1 (MQ=255)                                 cTTCGATGGCACGCAGAAAACGCAGGCGGAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGgcg                                                                                                                  >  1:232221/1‑149 (MQ=255)                                 cTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGgcg                                                                                                                  >  2:300155/1‑149 (MQ=255)                                 cTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGgcg                                                                                                                  <  2:9898/149‑1 (MQ=255)                                     gATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCt                                                                                                                >  6:57820/1‑147 (MQ=255)                                     gATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGa                                                                                                              <  3:201077/149‑1 (MQ=255)                                     gATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGa                                                                                                              <  2:293730/149‑1 (MQ=255)                                         gCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAgcgc                                                                                                          <  8:95650/149‑1 (MQ=255)                                           aCGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGt                                                                                                        >  7:162659/1‑149 (MQ=255)                                           aCGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGt                                                                                                        >  6:359811/1‑149 (MQ=255)                                             gCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTc                                                                                                       >  8:346224/1‑148 (MQ=255)                                               aGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAg                                                                                                    <  5:57820/149‑1 (MQ=255)                                                gAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGCGCGCGTCGAGc                                                                                                   >  7:160210/1‑149 (MQ=255)                                                   aaCGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgct                                                                                                >  1:143207‑M1/1‑97 (MQ=255)                                                           cgcaggcgcCATTCGGCAAAGCTGATGCCCAGTTCGCGCAGAACCTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCaa                                                                                        <  3:299001/149‑1 (MQ=255)                                                           cgcaggcgcCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCaa                                                                                        <  5:411316/149‑1 (MQ=255)                                                           cgcaggcgcCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCaa                                                                                        <  8:162659/149‑1 (MQ=255)                                                              aggcgcCCTTCGCCACAGCTGATGCCCAGTGCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCGGACGGGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGcc                                                                                     <  7:154360/149‑1 (MQ=255)                                                              aggcgcCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGa                                                                                                     <  6:75204/133‑1 (MQ=255)                                                              aggcgcCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGa                                                                                                     >  5:75204/1‑133 (MQ=255)                                                                      ttCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCtgt                                                                             <  5:225468/149‑1 (MQ=255)                                                                         gCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTggg                                                                          >  7:378691/1‑149 (MQ=255)                                                                              aGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAAc                                                                     <  4:257554/149‑1 (MQ=255)                                                                               gCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACg                                                                    >  5:346636/1‑149 (MQ=255)                                                                                  gATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAg                                                                                                    <  8:60560/114‑1 (MQ=255)                                                                                  gATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAg                                                                                                    >  7:60560/1‑114 (MQ=255)                                                                                   aTGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAg                                                                <  8:378691/149‑1 (MQ=255)                                                                                   aTGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAg                                                                <  5:52627/149‑1 (MQ=255)                                                                                      cccAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTa                                                             <  7:346224/149‑1 (MQ=255)                                                                                       ccAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgccc                                                            >  4:259569‑M1/1‑61 (MQ=255)                                                                                       ccAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTc                                                                                                       <  4:350573/106‑1 (MQ=255)                                                                                       ccAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTc                                                                                                       >  3:350573/1‑106 (MQ=255)                                                                                       ccAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCa                                                                 <  7:12249/144‑1 (MQ=255)                                                                                       ccAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCa                                                                 >  8:12249/1‑144 (MQ=255)                                                                                        cAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGGGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAg                                                            >  8:117988/1‑148 (MQ=255)                                                                                        cAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAg                                                            >  7:247504/1‑148 (MQ=255)                                                                                              gcgcAGAAACTGGCGGGCCACGGTGCGTTCGCAGCAGTGAACGCCTGCGGCCCAGTCGGCCAGCCGGCGGTAGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAACCCATCGATGTGCGCAAACGGCAGGGAGCAGGc                                                       >  8:126320/1‑147 (MQ=255)                                                                                               cgcAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAg                                                    >  7:210195/1‑149 (MQ=255)                                                                                                  aGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCtgtg                                                                            >  4:36320/1‑122 (MQ=255)                                                                                                  aGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCtgtg                                                                            <  3:36320/122‑1 (MQ=255)                                                                                                     aaCTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgcccgctggccgactggg                                              <  3:259569‑M1/149‑103 (MQ=255)                                                                                                      aCTGGCGGGCCAGGGTGCGTTCGCTGTCGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggc                                             >  3:257853‑M2/1‑144 (MQ=255)                                                                                                      aCTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgcccgctggccgactgggc                                             <  2:143207‑M1/149‑104 (MQ=255)                                                                                                      aCTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggc                                             >  3:210685‑M2/1‑144 (MQ=255)                                                                                                         ggCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                           >  3:102798/1‑148 (MQ=255)                                                                                                          gCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                           >  2:198447/1‑147 (MQ=255)                                                                                                             ggCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCcagca                                      <  5:359811/149‑1 (MQ=255)                                                                                                             ggCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGGCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCcagca                                      <  1:261552/149‑1 (MQ=255)                                                                                                                cAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCAt                                                                                   >  5:117320/1‑101 (MQ=255)                                                                                                                cAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCAt                                                                                   <  6:117320/101‑1 (MQ=255)                                                                                                                cAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCagcagc                                    >  4:223656/1‑148 (MQ=255)                                                                                                                cAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAgcagca                                   <  1:198447/149‑1 (MQ=255)                                                                                                                  gggTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGTGCCATCAGCAAc                                 <  8:247504/149‑1 (MQ=255)                                                                                                                  gggTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAAc                                 <  2:232221/149‑1 (MQ=255)                                                                                                                   ggTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGc                                                                                      >  2:184787/1‑95 (MQ=255)                                                                                                                   ggTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGc                                                                                      <  1:184787/95‑1 (MQ=255)                                                                                                                        gTTCGCTGATGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTc                            >  6:266834/1‑148 (MQ=255)                                                                                                                         ttCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                           <  6:122802/132‑1 (MQ=255)                                                                                                                         ttCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                           >  5:122802/1‑132 (MQ=255)                                                                                                                           cGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAg                         <  3:223656/148‑1 (MQ=255)                                                                                                                           cGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAg                         <  4:102798/148‑1 (MQ=255)                                                                                                                            gCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAg                         >  5:417578/1‑147 (MQ=255)                                                                                                                                aCGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGTCTCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTATCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTa                    <  2:307971/148‑1 (MQ=255)                                                                                                                                    gtACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgg                                               <  3:290088‑M2/117‑4 (MQ=255)                                                                                                                                    gtACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgg                                               >  4:290088‑M2/1‑114 (MQ=255)                                                                                                                                        gcgTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCa           <  8:160210/149‑1 (MQ=255)                                                                                                                                           tGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGgc        >  2:278011/1‑149 (MQ=255)                                                                                                                                               gCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgcccgctggccgactgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagt    >  3:210685‑M1/1‑5 (MQ=255)                                                                                                                                               gCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgcccgctggccgactgggccgcacgcgtacacgacagcgaacgcaccctggcccgccagt    >  3:257853‑M1/1‑5 (MQ=255)                                                                                                                                               gCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccg                                                                          >  4:282653‑M1/1‑5 (MQ=255)                                                                                                                                               gCCCAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccg                                                                          <  3:282653‑M1/79‑75 (MQ=255)                                                                                                                                               gCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagt    <  2:143207‑M2/149‑47 (MQ=255)                                                                                                                                                cccAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagtt   <  3:259569‑M2/149‑48 (MQ=255)                                                                                                                                                 ccAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgcccgctggccgactgggccgcacgcgtac                                  <  3:290088‑M1/117‑115 (MQ=255)                                                                                                                                                 ccAccctggcctgctacctgccgtttgcccacagcgatggcttgcgccaggtgctcgacgcgctcagcgccgagccgggggacaaccgcccgctggccgactgggccgcacgcgtac                                  >  4:290088‑M1/1‑3 (MQ=255)                                                                                                                                                  cAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGt  >  4:47183/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                   AATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCACGCAGAAAACGCAGGCGCAGGCGCCATTCGCCAAAGCTGATGCCCAGTTCGCGCAGAAACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGT  >  NC_002947/5519049‑5519341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.