New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5519195	69 (1.080)	4 (0.070)	4/244	NT	6.2%	coding (535/789 nt)	PP_4852	AraC family transcriptional regulator
	?	NC_002947	= 5519293	55 (0.890)					coding (437/789 nt)	PP_4852	AraC family transcriptional regulator

ACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAGGCTGCACGGGTGCGGTGGCAG  >  NC_002947/5519150‑5519441                                                                                                                                                |                                                                                                                                                     aCTGGCGGGCCAGGGTGCGTTCGCTGTCGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggc                                                                                                                                                 >  3:257853‑M2/1‑144 (MQ=255) aCTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggc                                                                                                                                                 >  3:210685‑M2/1‑144 (MQ=255)    ggCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                                                                                                                               >  3:102798/1‑148 (MQ=255)     gCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                                                                                                                               >  2:198447/1‑147 (MQ=255)        ggCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCcagca                                                                                                                                          <  5:359811/149‑1 (MQ=255)        ggCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGGCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCcagca                                                                                                                                          <  1:261552/149‑1 (MQ=255)           cAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCagcagc                                                                                                                                        >  4:223656/1‑148 (MQ=255)           cAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAgcagca                                                                                                                                       <  1:198447/149‑1 (MQ=255)             gggTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGTGCCATCAGCAAc                                                                                                                                     <  8:247504/149‑1 (MQ=255)             gggTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAAc                                                                                                                                     <  2:232221/149‑1 (MQ=255)                   gTTCGCTGATGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTc                                                                                                                                >  6:266834/1‑148 (MQ=255)                    ttCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                                                                                                                               <  6:122802/132‑1 (MQ=255)                    ttCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGgcgc                                                                                                                                               >  5:122802/1‑132 (MQ=255)                      cGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAg                                                                                                                             <  3:223656/148‑1 (MQ=255)                      cGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAg                                                                                                                             <  4:102798/148‑1 (MQ=255)                       gCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAg                                                                                                                             >  5:417578/1‑147 (MQ=255)                           aCGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGTCTCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTATCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTa                                                                                                                        <  2:307971/148‑1 (MQ=255)                               gtACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgg                                                                                                                                                   >  4:290088‑M2/1‑114 (MQ=255)                               gtACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgg                                                                                                                                                   <  3:290088‑M2/117‑4 (MQ=255)                                   gcgTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCa                                                                                                               <  8:160210/149‑1 (MQ=255)                                      tGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGgc                                                                                                            >  2:278011/1‑149 (MQ=255)                                          gCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagt                                                                                                        <  2:143207‑M2/149‑47 (MQ=255)                                           cccAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagtt                                                                                                       <  3:259569‑M2/149‑48 (MQ=255)                                             cAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGt                                                                                                      >  4:47183/1‑148 (MQ=255)                                                   gCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCaa                                                                                                                              >  2:258203/1‑118 (MQ=255)                                                   gCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCaa                                                                                                                              <  1:258203/118‑1 (MQ=255)                                                   gCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTc                                                                                               <  8:210195/149‑1 (MQ=255)                                                     cAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTcgc                                                                                                                              >  6:200986/1‑114 (MQ=255)                                                     cAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTcgc                                                                                                                              <  5:200986/116‑3 (MQ=255)                                                       gcgggcggTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTc                                                                                            >  4:261446/1‑148 (MQ=255)                                                         gggcggTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagtttctgcgcgaactgg                                                                                         >  4:259569‑M2/1‑88 (MQ=255)                                                          ggcggTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCTCGCTCGTCCTCg                                                                                        <  1:278011/149‑1 (MQ=255)                                                           gcggTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCgg                                                                                       >  6:385674/1‑149 (MQ=255)                                                           gcggTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCgg                                                                                       <  6:346636/149‑1 (MQ=255)                                                           gcggTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCgg                                                                                       <  5:266834/149‑1 (MQ=255)                                                                    ccccGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTc                                                                                               >  1:320735/1‑132 (MQ=255)                                                                    ccccGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTc                                                                                               <  2:320735/132‑1 (MQ=255)                                                                       cGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggc                                                                                                                                                 <  3:282653‑M2/79‑6 (MQ=255)                                                                       cGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggc                                                                                                                                                 >  4:282653‑M2/1‑74 (MQ=255)                                                                               cgcTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTAAGATTGCGCCgg                                                                   >  1:139794/1‑149 (MQ=255)                                                                                  tGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGc                                                                 >  5:257122/1‑148 (MQ=255)                                                                                    aGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCg                                                                <  5:385674/147‑1 (MQ=255)                                                                                         gTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCAc                                                         <  6:257122/149‑1 (MQ=255)                                                                                           cGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCAcc                                                        >  1:201969/1‑148 (MQ=255)                                                                                            gAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCAcc                                                        >  2:25062/1‑147 (MQ=255)                                                                                             aGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGtgggccgcacgcgtacacgtcagcgaacgcaccctggcccgccagtttctgcgcgaactgggcatcagctttggcgaatggcgcctgcgcctgcgtt                                                     >  1:143207‑M2/1‑52 (MQ=255)                                                                                              gCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTgcg                                                                       <  1:43188/130‑1 (MQ=255)                                                                                              gCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTgcg                                                                       >  2:43188/1‑130 (MQ=255)                                                                                              gCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAgg                                                    <  2:201969/149‑1 (MQ=255)                                                                                                 ccTGGCGCAAGCCATCGCTGTGGGCAAACGGCGGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGaa                                                              <  8:26046/136‑1 (MQ=255)                                                                                                  cTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATgg                                                >  7:388495/1‑149 (MQ=255)                                                                                                    ggCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGcc                                              >  2:370023/1‑149 (MQ=255)                                                                                                     gcgcAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAgg                                                                                                             <  4:327124/85‑1 (MQ=255)                                                                                                     gcgcAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAgg                                                                                                             >  3:327124/1‑85 (MQ=255)                                                                                                       gcAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCtt                                            >  7:350003/1‑148 (MQ=255)                                                                                                             cATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATg                                     >  8:175698/1‑149 (MQ=255)                                                                                                             cATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATg                                     >  4:59178/1‑149 (MQ=255)                                                                                                              aTCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGt                                    >  2:284794/1‑149 (MQ=255)                                                                                                                    gtgGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGa                              >  5:189892/1‑149 (MQ=255)                                                                                                                     tgGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCCCGCTCGTCCTCGGGCACCTTGAGATTGCGCCGGGCGAAGTCAGCGAGGATGGCCTTGAGGATGTCAATGa                              >  7:86449/1‑148 (MQ=255)                                                                                                                     tgGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGa                              <  3:59178/148‑1 (MQ=255)                                                                                                                      gggCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGat                             >  5:315675/1‑148 (MQ=255)                                                                                                                       ggCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGatca                           >  1:273221/1‑149 (MQ=255)                                                                                                                         cAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGatcat                          >  1:104466/1‑148 (MQ=255)                                                                                                                          aaaCGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGAtcatca                        <  3:47183/149‑1 (MQ=255)                                                                                                                            atctcacgTACCAGGCCAGGGGGGGCGGCATCATCAACTGGGCAAGCAGTACCTGTACCAGGCGCGTGTCACGCTTGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAgg                      <  3:114209/142‑1 (MQ=255)                                                                                                                                      gCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAGGCTGCACGGGt            <  6:417578/149‑1 (MQ=255)                                                                                                                                        aGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAGGCTGCACGGGTGc          >  6:303515/1‑149 (MQ=255)                                                                                                                                           ccAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAGGCTGCACGGGTGCGGt       <  8:350003/149‑1 (MQ=255)                                                                                                                                                gTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAGGCTGCACGGGTGCGGTGGCAg  <  2:104466/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     ACTGGCGGGCCAGGGTGCGTTCGCTGACGTGTACGCGTGCGGCCCAGTCGGCCAGCGGGCGGTTGTCCCCCGGCTCGGCGCTGAGCGCGTCGAGCACCTGGCGCAAGCCATCGCTGTGGGCAAACGGCAGGTAGCAGGCCAGGGTGGGCGCCAGCAGCAACTGGTCAAGCAGTACCTGTACCAGGCGCTGGTCACGCTCGTCCTCGGCCACCTTGAGATTGCGCCGGGCGAAGTCACCGAGGATGGCCTTGAGGATGTCACTGATCATCAGGCTGCACGGGTGCGGTGGCAG  >  NC_002947/5519150‑5519441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.