New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5552330 =	53 (0.830)	4 (0.070)	3/240	NT	7.1%	coding (1559/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	5552377 =	54 (0.890)					intergenic (+40/+621)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein

GCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGT  >  NC_002947/5552183‑5552476                                                                                                                                                     |                                                                                                                                                   gCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAg                                                                                                                                                   <  2:291137/149‑1 (MQ=255)  cccGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAgg                                                                                                                                                  >  8:307041/1‑149 (MQ=255)       agatctcgagggtttcccaaggtctatgaaaagagttttgttaccctcttgggtggggcttgtagtatctacgaccttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCtt                                                                                                                                               >  6:402701‑M1/143‑148 (MQ=255)       agatctcgagggtttcccaaggtctatgaaaagagttttgttaccctcttgggtggggcttgtagtatctacgaccttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTg                                                                                                                                              <  6:284032‑M1/7‑1 (MQ=255)         ggCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGaaa                                                                                                                                           <  6:365269/149‑1 (MQ=255)         ggCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGaaa                                                                                                                                           <  7:307041/149‑1 (MQ=255)          gCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGaaa                                                                                                                                           <  6:387419/148‑1 (MQ=255)          gCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGa                                                                                                                                             >  5:387419/1‑146 (MQ=255)          gCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAg                                                                                                                                          >  6:255943/1‑149 (MQ=255)              gACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTg                                                                                                                                      >  5:209176/1‑149 (MQ=255)               accaccCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGc                                                                                                                                     <  5:255943/149‑1 (MQ=255)               accaccCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGc                                                                                                                                     <  5:237672/149‑1 (MQ=255)                          cACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCa                                                                                                                          >  2:134099/1‑149 (MQ=255)                          cACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCa                                                                                                                          >  1:81963/1‑149 (MQ=255)                               aGGTGTGGACACACACAGCCAACGTCGAGTTCGCGGAGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCAGGTGTATTTGCTGAC‑TACGCGTATGTATTTGAACAAGGCTTGAAAGCTAGCCCAGGCCGCCATGTgg                                                                                                                     >  5:157072/1‑149 (MQ=255)                                    tgGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTgg                                                                                                                >  3:256140/1‑149 (MQ=255)                                          ttttgttaccctcttgggtggggcttgtagtatctacgaccttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGcac                                                                                                            <  4:44374‑M1/41‑1 (MQ=255)                                           acacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAg                                                                                                         >  2:400974/1‑149 (MQ=255)                                                gCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                    <  4:69666/149‑1 (MQ=255)                                                 ccAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTTTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGATAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAg                                                                                                   <  4:111857/149‑1 (MQ=255)                                                 ccAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACATGGCGGCCTGGGcaa                                                                                                            <  7:55910/140‑2 (MQ=255)                                                 ccAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACATGGCGGCCTGGGcaa                                                                                                            >  8:55910/1‑139 (MQ=255)                                                  ccctcttgggtggggcttgtagtatctacgaccttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                    >  3:44374‑M1/100‑148 (MQ=255)                                                  cAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCGGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGt                                                                                                  <  7:86557/149‑1 (MQ=255)                                                       tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGcc                                                                                               >  6:131957/1‑147 (MQ=255)                                                       tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTa                                                                                             <  2:211271/149‑1 (MQ=255)                                                            ttCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACtt                                                                                        >  2:335868/1‑149 (MQ=255)                                                                     gcggcgCCTTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGTTGTATTTCCACACTTCCATACCCCCATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACaa                                                                                <  1:337786/149‑1 (MQ=255)                                                                         cgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCa                                                                           <  1:335868/149‑1 (MQ=255)                                                                            cGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTgg                                                                                                                     <  1:348665/104‑1 (MQ=255)                                                                            cGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTgg                                                                                                                     >  2:348665/1‑104 (MQ=255)                                                                             gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCAAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACta                                                                        >  6:196902/1‑147 (MQ=255)                                                                                tGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTaa                                                                     <  5:131957/148‑1 (MQ=255)                                                                                  cttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                    <  3:149036‑M1/49‑1 (MQ=255)                                                                                  cttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                    >  4:149036‑M1/68‑116 (MQ=255)                                                                                   ggcgTTGTTGATTGTGGTGTCGGTGGTTCTGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGTCGCCATGTGGCCTGTGCTCAAGCCTGAGTGCCTAGACTTCATCACTAGTTCACTTTAAAAct                                                                 <  4:256140/149‑1 (MQ=255)                                                                                   ggcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAAct                                                                 >  6:63657/1‑149 (MQ=255)                                                                                     cggtgttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActct                                                               <  4:253954/146‑1 (MQ=255)                                                                                           tgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAg                                                         >  3:24016/1‑149 (MQ=255)                                                                                            gATTGTGCAGTCCCGGTTGCCGGTCTATTTGCTGAC‑TAAGGGGATGTATTTGAACAACGATAGAAAGCATGCCCACGCCGCCATGTCGCCTGCGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTACAATTTAAAACTCTAACTAg                                                         >  2:203402/1‑148 (MQ=255)                                                                                             aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGtt                                                                             <  6:33572/127‑1 (MQ=255)                                                                                             aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGtt                                                                             >  5:33572/1‑127 (MQ=255)                                                                                                   gtgtCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCGGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCGTCACAAGTTCACTTTAAAGCTCTCACTAGCCattcgg                                                 >  4:305066/1‑144 (MQ=255)                                                                                                   gtgtCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                 <  6:209176/149‑1 (MQ=255)                                                                                                    tgtCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                 >  2:317798/1‑148 (MQ=255)                                                                                                      tCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                               <  1:134099/148‑1 (MQ=255)                                                                                                      tCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                               <  5:245066/148‑1 (MQ=255)                                                                                                        ggtgTTGCCGGTGTATTTGCTGAC‑TACGCTTATGTATTTGAACAAGGCTTTAAAGCTTGCCCAGGCCGCCATTTGGACTGGTCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGc                                             <  5:196902/145‑1 (MQ=255)                                                                                                        ggggTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCa                                            <  1:400974/149‑1 (MQ=255)                                                                                                          ggTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCaaa                                          <  5:63657/149‑1 (MQ=255)                                                                                                                cGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAAc                                      >  4:56178/1‑147 (MQ=255)                                                                                                                       tttGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCg                               >  2:302855/1‑147 (MQ=255)                                                                                                                       tttGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa                             <  4:24016/149‑1 (MQ=255)                                                                                                                                 tACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAtactac                     >  6:301150/1‑148 (MQ=255)                                                                                                                                  aCGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                              >  6:261957/1‑122 (MQ=255)                                                                                                                                  aCGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                              <  5:261957/122‑1 (MQ=255)                                                                                                                                      ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                               >  4:230746/1‑117 (MQ=255)                                                                                                                                      ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                               <  3:230746/117‑1 (MQ=255)                                                                                                                                         tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                <  6:299518/129‑1 (MQ=255)                                                                                                                                         tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                >  5:299518/1‑129 (MQ=255)                                                                                                                                           tATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccaccc          <  2:81963/149‑1 (MQ=255)                                                                                                                                                    aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGt  >  5:284032/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCCCGACCGGCATGACCACCCTGGCCACCGAGGTGTGGGCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGT  >  NC_002947/5552183‑5552476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.