New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5552330 =	53 (0.830)	4 (0.070)	3/240	NT	7.1%	coding (1559/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	5552377 =	54 (0.890)					intergenic (+40/+621)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein

GCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCT  >  NC_002947/5552230‑5552518                                                                                                                                                     |                                                                                                                                              gCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                                                              <  4:69666/149‑1 (MQ=255)  ccAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTTTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGATAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAg                                                                                                                                             <  4:111857/149‑1 (MQ=255)   ccctcttgggtggggcttgtagtatctacgaccttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                                                              >  3:44374‑M1/100‑148 (MQ=255)   cAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCGGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGt                                                                                                                                            <  7:86557/149‑1 (MQ=255)        tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGcc                                                                                                                                         >  6:131957/1‑147 (MQ=255)        tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTa                                                                                                                                       <  2:211271/149‑1 (MQ=255)             ttCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACtt                                                                                                                                  >  2:335868/1‑149 (MQ=255)                      gcggcgCCTTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGTTGTATTTCCACACTTCCATACCCCCATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACaa                                                                                                                          <  1:337786/149‑1 (MQ=255)                          cgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCa                                                                                                                     <  1:335868/149‑1 (MQ=255)                              gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCAAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACta                                                                                                                  >  6:196902/1‑147 (MQ=255)                                 tGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTaa                                                                                                               <  5:131957/148‑1 (MQ=255)                                   cttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                                                              >  4:149036‑M1/68‑116 (MQ=255)                                   cttgttctttgctttcaactggctagtgagagttttaaagtgaacttgtgatgaagtctaggcactcAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGa                                                                                                                                              <  3:149036‑M1/49‑1 (MQ=255)                                    ggcgTTGTTGATTGTGGTGTCGGTGGTTCTGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGTCGCCATGTGGCCTGTGCTCAAGCCTGAGTGCCTAGACTTCATCACTAGTTCACTTTAAAAct                                                                                                           <  4:256140/149‑1 (MQ=255)                                    ggcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAAct                                                                                                           >  6:63657/1‑149 (MQ=255)                                      cggtgttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActct                                                                                                         <  4:253954/146‑1 (MQ=255)                                            tgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAg                                                                                                   >  3:24016/1‑149 (MQ=255)                                             gATTGTGCAGTCCCGGTTGCCGGTCTATTTGCTGAC‑TAAGGGGATGTATTTGAACAACGATAGAAAGCATGCCCACGCCGCCATGTCGCCTGCGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTACAATTTAAAACTCTAACTAg                                                                                                   >  2:203402/1‑148 (MQ=255)                                              aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGtt                                                                                                                       >  5:33572/1‑127 (MQ=255)                                              aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGtt                                                                                                                       <  6:33572/127‑1 (MQ=255)                                                    gtgtCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCGGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCGTCACAAGTTCACTTTAAAGCTCTCACTAGCCattcgg                                                                                           >  4:305066/1‑144 (MQ=255)                                                    gtgtCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                                                           <  6:209176/149‑1 (MQ=255)                                                     tgtCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                                                           >  2:317798/1‑148 (MQ=255)                                                       tCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         <  5:245066/148‑1 (MQ=255)                                                       tCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         <  1:134099/148‑1 (MQ=255)                                                         ggtgTTGCCGGTGTATTTGCTGAC‑TACGCTTATGTATTTGAACAAGGCTTTAAAGCTTGCCCAGGCCGCCATTTGGACTGGTCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGc                                                                                       <  5:196902/145‑1 (MQ=255)                                                         ggggTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCa                                                                                      <  1:400974/149‑1 (MQ=255)                                                           ggTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCaaa                                                                                    <  5:63657/149‑1 (MQ=255)                                                                 cGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAAc                                                                                >  4:56178/1‑147 (MQ=255)                                                                        tttGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCg                                                                         >  2:302855/1‑147 (MQ=255)                                                                        tttGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa                                                                       <  4:24016/149‑1 (MQ=255)                                                                                  tACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAtactac                                                               >  6:301150/1‑148 (MQ=255)                                                                                   aCGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                                                                        >  6:261957/1‑122 (MQ=255)                                                                                   aCGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                                                                        <  5:261957/122‑1 (MQ=255)                                                                                       ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         <  3:230746/117‑1 (MQ=255)                                                                                       ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         >  4:230746/1‑117 (MQ=255)                                                                                          tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                          <  6:299518/129‑1 (MQ=255)                                                                                          tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                          >  5:299518/1‑129 (MQ=255)                                                                                            tATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccaccc                                                    <  2:81963/149‑1 (MQ=255)                                                                                                    tcaggcttgtgcccaggccacatggcggcctgggcaagctttcaagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAg                                                                             <  3:149036‑M2/67‑1 (MQ=255)                                                                                                    tcaggcttgtgcccaggccacatggcggcctgggcaagctttcaagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAg                                                                             >  4:149036‑M2/50‑116 (MQ=255)                                                                                                    tcaggcttgtgcccaggccacatggcggcctgggcaagctttcaagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAggg                                             >  3:44374‑M2/50‑148 (MQ=255)                                                                                                     aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGt                                            >  5:284032/1‑148 (MQ=255)                                                                                                          TTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaa                                       <  5:284447‑M1/148‑1 (MQ=255)                                                                                                           TGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActct                                                                                                         <  7:390438‑M1/81‑1 (MQ=255)                                                                                                           TGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActct                                                                                                         >  8:390438‑M1/1‑81 (MQ=255)                                                                                                            gtgcccaggccacatggcggcctgggcaagctttcaagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa                                     <  4:44374‑M2/107‑1 (MQ=255)                                                                                                             aaaGCATGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAACCCCCACCCAAGAGGGTAACAAAAct                                   >  8:65342/1‑149 (MQ=255)                                                                                                                 cTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCa                                                                                      <  5:55730/94‑1 (MQ=255)                                                                                                                 cTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCa                                                                                      >  6:55730/1‑94 (MQ=255)                                                                                                                 cTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCttt                               >  5:182071/1‑149 (MQ=255)                                                                                                                  ttGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCaaa                                                                                    <  3:396227/95‑1 (MQ=255)                                                                                                                  ttGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCaaa                                                                                    >  4:396227/1‑95 (MQ=255)                                                                                                                      ccAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCTCAACTTCTCTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATa                          <  1:203402/149‑1 (MQ=255)                                                                                                                      ccAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCa                            >  2:334215/1‑147 (MQ=255)                                                                                                                       cAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAgg                                              >  1:330889/1‑128 (MQ=255)                                                                                                                       cAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAgg                                              <  2:330889/128‑1 (MQ=255)                                                                                                                       cAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTCCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCa                            >  5:212736/1‑146 (MQ=255)                                                                                                                        aGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAg                                                                             <  8:209637/96‑1 (MQ=255)                                                                                                                        aGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAg                                                                             >  7:209637/1‑96 (MQ=255)                                                                                                                            cgccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                                                                        <  6:367133/81‑1 (MQ=255)                                                                                                                            cgccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAg                                                                                        >  5:367133/1‑81 (MQ=255)                                                                                                                             gccATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTg                   >  4:197997/1‑149 (MQ=255)                                                                                                                                     gCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAAccc           >  2:211345/1‑149 (MQ=255)                                                                                                                                       cTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATa                          >  2:285836/1‑132 (MQ=255)                                                                                                                                       cTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATa                          <  1:285836/132‑1 (MQ=255)                                                                                                                                       cTGGGCACAAGCCTGAGTGCCTAGACTCCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTc         <  6:212736/149‑1 (MQ=255)                                                                                                                                             acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCttt                               <  6:370911/121‑1 (MQ=255)                                                                                                                                             acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCttt                               >  5:370911/1‑121 (MQ=255)                                                                                                                                             acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATc   >  7:252709/1‑149 (MQ=255)                                                                                                                                              caagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCt  <  6:284032‑M2/142‑1 (MQ=255)                                                                                                                                               aagcctGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCt  >  6:402701‑M2/7‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                              GCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGAC‑TACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCT  >  NC_002947/5552230‑5552518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.