New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5605610 =	63 (0.980)	9 (0.150)	7/244	NT	13.3%	coding (337/1419 nt)	PP_4926	HlyD family secretion protein
	?	NC_002947	5605657 =	57 (0.930)					coding (290/1419 nt)	PP_4926	HlyD family secretion protein

CCACATCGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCC  >  NC_002947/5605463‑5605750                                                                                                                                                    |                                                                                                                                             gccagtgcatcccttgccgcgctacctgcagtggagcctgctgatgttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacagg                                                                                                                                             <  8:381322‑M1/2‑1 (MQ=255) ccACATCGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTgg                                                                                                                                             >  2:205291/1‑149 (MQ=255)    caTCGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGcc                                                                                                                                           >  8:237945/1‑148 (MQ=255)    caTCGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCa                                                                                                                                          >  8:231718/1‑149 (MQ=255)    agtgcatcccttgccgcgctacctgcagtggagcctgctgatgttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGc                                                                                                                                            <  4:1871‑M1/3‑1 (MQ=255)      tCGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATc                                                                                                                                        <  1:206635/149‑1 (MQ=255)       cGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATc                                                                                                                                        >  5:286890/1‑148 (MQ=255)        gCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATcg                                                                                                                                       <  8:144998/148‑1 (MQ=255)        catcccttgccgcgatacctgcagtggagcctgctgatgttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATcga                                                                                                                                      <  6:234103‑M1/9‑1 (MQ=255)            tCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCATCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCgacgac                                                                                                                                  <  7:237945/149‑1 (MQ=255)            tCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCgacgac                                                                                                                                  <  7:231718/149‑1 (MQ=255)              cAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGt                                                                                                                                <  1:205291/149‑1 (MQ=255)                      tCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATcgac                                                                                                                                     >  1:25566/1‑136 (MQ=255)                      tCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATcgac                                                                                                                                     <  2:25566/136‑1 (MQ=255)                         gcagTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGc                                                                                                                     <  1:267514/149‑1 (MQ=255)                          ctgcagtggagcctgctgatgttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGca                                                                                                                    <  2:29466‑M1/27‑1 (MQ=255)                          ctgcagtggagcctgctgatgttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGca                                                                                                                    <  6:59386‑M1/27‑1 (MQ=255)                          ctgcagtggagcctgctgatgttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGca                                                                                                                    <  6:293801‑M1/27‑1 (MQ=255)                          cagTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGca                                                                                                                    >  4:157130/1‑149 (MQ=255)                             tgtgCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGcacca                                                                                                                 >  6:111682/1‑149 (MQ=255)                                    gcgcGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGAc                                                                                                          >  5:283767/1‑149 (MQ=255)                                    gcgcGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGAc                                                                                                          >  4:122694/1‑149 (MQ=255)                                          gCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCt                                                                                                    <  7:10680/149‑1 (MQ=255)                                           ccTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGGCAACTGCCCTTCCTCCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTg                                                                                                   <  1:132484/149‑1 (MQ=255)                                               ttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGcc                                                                                                >  5:59386‑M1/102‑148 (MQ=255)                                               ttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCt                                                                                               >  1:29466‑M1/102‑149 (MQ=255)                                               gTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGc                                                                                                 <  2:228363/147‑1 (MQ=255)                                                tCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTg                                                                                              >  8:183813/1‑149 (MQ=255)                                                  atcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGt                                                                                             >  5:234103‑M1/99‑148 (MQ=255)                                                  atcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTa                                                                                            >  5:293801‑M1/99‑149 (MQ=255)                                                   aTCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTa                                                                                            >  3:228750/1‑148 (MQ=255)                                                   aTCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTAt                                                                                           >  1:341300/1‑149 (MQ=255)                                                    tCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTAt                                                                                           >  2:145605/1‑148 (MQ=255)                                                      tgtgCAGCCAGCAGTTCGCTGCCCAGGCGCATGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCaa                                                                                        >  1:33735/1‑149 (MQ=255)                                                       gtgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAAc                                                                                       >  5:315829/1‑149 (MQ=255)                                                       gtgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAAc                                                                                       >  4:19508/1‑149 (MQ=255)                                                        tgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAAc                                                                                       <  5:111682/148‑1 (MQ=255)                                                        tgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACt                                                                                      >  1:70070/1‑149 (MQ=255)                                                         gCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTc                                                                                                       <  3:265924/131‑1 (MQ=255)                                                         gCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTc                                                                                                       >  4:265924/1‑131 (MQ=255)                                                          cagccagcAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACtt                                                                                     >  2:368695/1‑148 (MQ=255)                                                                  agTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGc                                                                             >  6:425267/1‑148 (MQ=255)                                                                        cTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTggg                                                                      <  6:283767/149‑1 (MQ=255)                                                                                 cgcTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTATATCAACTTGCTCCTGCCACTGGGCACGATCtt                                                             <  6:286890/149‑1 (MQ=255)                                                                                        tGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCg                                                      <  4:228750/149‑1 (MQ=255)                                                                                          atgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGc                                                                                                 >  4:8950‑M1/59‑104 (MQ=255)                                                                                          atgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGc                                                                                                 <  3:8950‑M1/46‑1 (MQ=255)                                                                                           cAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGc                                                    >  6:156955/1‑148 (MQ=255)                                                                                            aGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCAc                                                  >  4:277917/1‑149 (MQ=255)                                                                                              ccTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTg                                                >  4:341726/1‑149 (MQ=255)                                                                                                  ggTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGa                                            <  3:341726/149‑1 (MQ=255)                                                                                                  ggTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGa                                            <  3:19508/149‑1 (MQ=255)                                                                                                   gTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGAt                                           <  5:425267/149‑1 (MQ=255)                                                                                                       aCTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACa                                       <  6:315829/149‑1 (MQ=255)                                                                                                         tGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGc                                                                             <  4:350658/109‑1 (MQ=255)                                                                                                         tGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGc                                                                             >  3:350658/1‑109 (MQ=255)                                                                                                          gCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATc                                     >  6:170923/1‑148 (MQ=255)                                                                                                           cccTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATc                                     <  7:183813/147‑1 (MQ=255)                                                                                                              ttCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGAtc                                 >  8:137162/1‑148 (MQ=255)                                                                                                              ttCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGAtc                                 >  7:145354/1‑148 (MQ=255)                                                                                                                 cAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCAc                             <  3:277917/149‑1 (MQ=255)                                                                                                                  aGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCAcc                            <  5:156955/149‑1 (MQ=255)                                                                                                                       gACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTGCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGAt                         <  7:137162/147‑1 (MQ=255)                                                                                                                       gACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGAt                         <  3:122694/147‑1 (MQ=255)                                                                                                                        aCCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGc                       >  8:26200/1‑148 (MQ=255)                                                                                                                         ccAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGc                       >  3:35039/1‑147 (MQ=255)                                                                                                                          ccgCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAg                    <  1:145605/147‑1 (MQ=255)                                                                                                                          cAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCg                           >  6:412866/1‑142 (MQ=255)                                                                                                                          cAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCg                           <  5:412866/142‑1 (MQ=255)                                                                                                                           aGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGc                   <  1:368695/149‑1 (MQ=255)                                                                                                                               caTCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAg               >  4:112705/1‑149 (MQ=255)                                                                                                                               caTCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAg               <  2:70070/149‑1 (MQ=255)                                                                                                                                 tCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAgg              >  7:103202/1‑148 (MQ=255)                                                                                                                                      tttGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAGGCCCAGGCAAgcg        >  6:396468/1‑149 (MQ=255)                                                                                                                                          cgcACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCa     <  4:35039/148‑1 (MQ=255)                                                                                                                                          cgcACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCa     <  2:33735/148‑1 (MQ=255)                                                                                                                                           gcACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGc   >  4:19718/1‑149 (MQ=255)                                                                                                                                            cACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGcc  <  2:341300/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                             CCACATCGCCGTCCAGCGCACTCAGCAGTGTGCTGGCGCGGGCCTGGTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGCGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCC  >  NC_002947/5605463‑5605750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.