New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5605610 =	63 (0.980)	9 (0.150)	7/244	NT	13.3%	coding (337/1419 nt)	PP_4926	HlyD family secretion protein
	?	NC_002947	5605657 =	57 (0.930)					coding (290/1419 nt)	PP_4926	HlyD family secretion protein

GTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGATGCACTGGC  >  NC_002947/5605509‑5605803                                                                                                                                                      |                                                                                                                                                   ttcatcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCt                                                                                                                                                    >  1:29466‑M1/102‑149 (MQ=255)  tCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTg                                                                                                                                                   >  8:183813/1‑149 (MQ=255)    atcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGt                                                                                                                                                  >  5:234103‑M1/99‑148 (MQ=255)    atcgggctggcgcttgcctgggcttgcatcggtgagatcgatgtcatcgccagtgccgaaggcaagatcgtgcccagtggcaggagcaagttgatacaGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTa                                                                                                                                                 >  5:293801‑M1/99‑149 (MQ=255)     aTCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTa                                                                                                                                                 >  3:228750/1‑148 (MQ=255)     aTCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTAt                                                                                                                                                >  1:341300/1‑149 (MQ=255)      tCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTAt                                                                                                                                                >  2:145605/1‑148 (MQ=255)        tgtgCAGCCAGCAGTTCGCTGCCCAGGCGCATGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCaa                                                                                                                                             >  1:33735/1‑149 (MQ=255)         gtgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAAc                                                                                                                                            >  4:19508/1‑149 (MQ=255)         gtgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAAc                                                                                                                                            >  5:315829/1‑149 (MQ=255)          tgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAAc                                                                                                                                            <  5:111682/148‑1 (MQ=255)          tgCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACt                                                                                                                                           >  1:70070/1‑149 (MQ=255)            cagccagcAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACtt                                                                                                                                          >  2:368695/1‑148 (MQ=255)                    agTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGc                                                                                                                                  >  6:425267/1‑148 (MQ=255)                          cTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTggg                                                                                                                           <  6:283767/149‑1 (MQ=255)                                   cgcTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTATATCAACTTGCTCCTGCCACTGGGCACGATCtt                                                                                                                  <  6:286890/149‑1 (MQ=255)                                          tGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCg                                                                                                           <  4:228750/149‑1 (MQ=255)                                             cAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGc                                                                                                         >  6:156955/1‑148 (MQ=255)                                              aGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCAc                                                                                                       >  4:277917/1‑149 (MQ=255)                                                ccTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTg                                                                                                     >  4:341726/1‑149 (MQ=255)                                                    ggTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGa                                                                                                 <  3:19508/149‑1 (MQ=255)                                                    ggTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGa                                                                                                 <  3:341726/149‑1 (MQ=255)                                                     gTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGAt                                                                                                <  5:425267/149‑1 (MQ=255)                                                         aCTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACa                                                                                            <  6:315829/149‑1 (MQ=255)                                                           tGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGc                                                                                                                                  >  3:350658/1‑109 (MQ=255)                                                           tGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGc                                                                                                                                  <  4:350658/109‑1 (MQ=255)                                                            gCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATc                                                                                          >  6:170923/1‑148 (MQ=255)                                                             cccTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATc                                                                                          <  7:183813/147‑1 (MQ=255)                                                                ttCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGAtc                                                                                      >  7:145354/1‑148 (MQ=255)                                                                ttCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGAtc                                                                                      >  8:137162/1‑148 (MQ=255)                                                                   cAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCAc                                                                                  <  3:277917/149‑1 (MQ=255)                                                                    aGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCAcc                                                                                 <  5:156955/149‑1 (MQ=255)                                                                         gACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTGCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGAt                                                                              <  7:137162/147‑1 (MQ=255)                                                                         gACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGAt                                                                              <  3:122694/147‑1 (MQ=255)                                                                          aCCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGc                                                                            >  8:26200/1‑148 (MQ=255)                                                                           ccAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGc                                                                            >  3:35039/1‑147 (MQ=255)                                                                            ccgCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAg                                                                         <  1:145605/147‑1 (MQ=255)                                                                            cAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCg                                                                                <  5:412866/142‑1 (MQ=255)                                                                            cAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCg                                                                                >  6:412866/1‑142 (MQ=255)                                                                             aGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGc                                                                        <  1:368695/149‑1 (MQ=255)                                                                                 caTCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAg                                                                    >  4:112705/1‑149 (MQ=255)                                                                                 caTCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAg                                                                    <  2:70070/149‑1 (MQ=255)                                                                                   tCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAgg                                                                   >  7:103202/1‑148 (MQ=255)                                                                                        tttGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAGGCCCAGGCAAgcg                                                             >  6:396468/1‑149 (MQ=255)                                                                                            cgcACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCa                                                          <  2:33735/148‑1 (MQ=255)                                                                                            cgcACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCa                                                          <  4:35039/148‑1 (MQ=255)                                                                                             gcACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGc                                                        >  4:19718/1‑149 (MQ=255)                                                                                              cACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGcc                                                       <  2:341300/149‑1 (MQ=255)                                                                                                   tacaggccagcgaggtcgcggtggtgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGAt                                                   >  5:293801‑M2/52‑149 (MQ=255)                                                                                                    acaggccagcgaggtcgcggtggtgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGAt                                                   >  5:234103‑M2/51‑148 (MQ=255)                                                                                                      aggccagcgaggtcgcggtggtgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGaa                                                >  1:29466‑M2/49‑149 (MQ=255)                                                                                                       ggccagcgaggtcgcggtggtgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGaa                                                >  5:59386‑M2/48‑148 (MQ=255)                                                                                                       GCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAAc                                               >  3:112705‑M1/1‑148 (MQ=255)                                                                                                        gccagcgaggtcgcggtggtgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACAt                                                                                           >  4:8950‑M2/47‑104 (MQ=255)                                                                                                        gccagcgaggtcgcggtggtgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACAt                                                                                           <  3:8950‑M2/58‑1 (MQ=255)                                                                                                         CATCGACGACGTGGATCGACTGCACCACCGCTGACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACAt                                             <  1:249920‑M1/149‑1 (MQ=255)                                                                                                         CATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACAt                                             <  4:760‑M1/148‑1 (MQ=255)                                                                                                         CATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACAt                                             <  4:148673‑M1/148‑1 (MQ=255)                                                                                                             gacgacGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATcagc                                         >  7:388675/1‑148 (MQ=255)                                                                                                              acgacgTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATcagcag                                       >  3:1871/1‑149 (MQ=255)                                                                                                               cgacgTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATcagc                                         <  8:388675/146‑1 (MQ=255)                                                                                                                 acgTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCt                                    <  8:145354/149‑1 (MQ=255)                                                                                                                   gTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTc                                   >  7:381322/1‑148 (MQ=255)                                                                                                                          gACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAGGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCa                            <  5:396468/148‑1 (MQ=255)                                                                                                                          gACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAg                           <  7:26200/149‑1 (MQ=255)                                                                                                                           tgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAg                           <  6:293801‑M2/122‑1 (MQ=255)                                                                                                                           tgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAg                           <  6:59386‑M2/122‑1 (MQ=255)                                                                                                                           tgcagtcgatccacgtcgtcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAg                           <  2:29466‑M2/122‑1 (MQ=255)                                                                                                                            cTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCa                            <  5:170923/146‑1 (MQ=255)                                                                                                                               caccacCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAgc                                                              >  1:260880/1‑109 (MQ=255)                                                                                                                               caccacCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAgc                                                              <  2:260880/109‑1 (MQ=255)                                                                                                                                  caccGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGcgcg                   >  5:50558/1‑149 (MQ=255)                                                                                                                                  caccGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCAGATGAACATCAGAAGGCTCCAATGCAGGTAGcgcg                   >  5:247384/1‑149 (MQ=255)                                                                                                                                   accGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCgg                  <  3:19718/149‑1 (MQ=255)                                                                                                                                           ccTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGa           >  6:255829/1‑149 (MQ=255)                                                                                                                                           ccTCGCTGGCCTGTATCAACTTGCTCCTGCCACCGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAg                                                                    <  2:50834/92‑1 (MQ=255)                                                                                                                                           ccTCGCTGGCCTGTATCAACTTGCTCCTGCCACCGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAg                                                                    >  1:50834/1‑92 (MQ=255)                                                                                                                                            cTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGAt          <  8:103202/149‑1 (MQ=255)                                                                                                                                             tcgatggccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTATCGCGGCAAGGGATg         <  6:234103‑M2/140‑1 (MQ=255)                                                                                                                                             tCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGATg         >  7:64744/1‑149 (MQ=255)                                                                                                                                               gCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCgg                  <  2:140049/138‑1 (MQ=255)                                                                                                                                                cTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGATGCAc      <  2:249920/149‑1 (MQ=255)                                                                                                                                                   gccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGATGCACt     <  4:1871‑M2/144‑1 (MQ=255)                                                                                                                                                    ccTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGATGCACTGGc  <  8:381322‑M2/147‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GTCGATCTGTGCAGCCAGCAGTTCGCTGCCCAGGCGCTTGATGTCAGCCTCGGTCAACTGCCCTTCCAGCTCGACCAGCACATCACCTTTGCGCACCGGCTGGCCATCGACGACGTGGATCGACTGCACCACCGC‑GACCTCGCTGGCCTGTATCAACTTGCTCCTGCCACTGGGCACGATCTTGCCTTCGGCACTGGCGATGACATCGATCTCACCGATGCAAGCCCAGGCAAGCGCCAGCCCGATGAACATCAGCAGGCTCCACTGCAGGTAGCGCGGCAAGGGATGCACTGGC  >  NC_002947/5605509‑5605803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.