New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	319208 =	48 (0.750)	4 (0.060)	4/246	NT	7.7%	coding (534/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	319244 =	49 (0.790)					coding (498/1815 nt)	PP_0264	sensor histidine kinase

GGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGT  >  NC_002947/319097‑319392                                                                                                                                                    |                                                                                                                                                     gggCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCa                                                                                                                                                      >  7:299414/1‑148 (MQ=255)       ggccgaaacttcgccttccgcccttacttcaacgaagccatggccggccaccttggccgcttcttcggccagggcaccacctcggccaagcgcggctacttctttGCCGACGATCCGCTCTCGGTCGCGCACGGCCGCGGCAaagaag                                                                                                                                                >  5:356484‑M1/106‑148 (MQ=255)           gaaacttcgccttccgcccttacttcaacgaagccatggccggccaccttggccgcttcttcggccagggcaccacctcggccaagcgcggctacttctttGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAaag                                                                                                                                                   >  5:114432‑M1/102‑141 (MQ=255)           gaaacttcgccttccgcccttacttcaacgaagccatggccggccaccttggccgcttcttcggccagggcaccacctcggccaagcgcggctacttctttGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAaag                                                                                                                                                   <  6:114432‑M1/40‑1 (MQ=255)                gATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCt                                                                                                                                      >  3:81394/1‑149 (MQ=255)                  tGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTg                                                                                                                                    <  7:164049/149‑1 (MQ=255)                      cACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGcc                                                                                                                                 >  3:181791/1‑148 (MQ=255)                      cACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGcc                                                                                                                                 >  3:199347/1‑148 (MQ=255)                      cACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCg                                                                                                                                <  6:142992/149‑1 (MQ=255)                           cATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAggtg                                                                                                                           >  4:160566/1‑149 (MQ=255)                               gtgATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGgtggtg                                                                                                                        <  3:160566/148‑1 (MQ=255)                                  aTCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAgg                                                                                                                             <  5:231669/140‑1 (MQ=255)                                  aTCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAgg                                                                                                                             >  6:231669/1‑140 (MQ=255)                                     ggTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTgg                                                                                                                  <  8:76373/148‑1 (MQ=255)                                      gTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGcc                                                                                                                >  3:182205/1‑149 (MQ=255)                                                 ctgctCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGCTCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGGGGTGCCCTGGCCGAAGAAGCGGc                                                                                                     >  8:12299/1‑149 (MQ=255)                                                    ctCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCaa                                                                                                  <  4:199347/149‑1 (MQ=255)                                                       gggCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGt                                                                                               <  4:182205/149‑1 (MQ=255)                                                               ggCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCgaa                                                                                                             >  2:359754/1‑127 (MQ=255)                                                               ggCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCgaa                                                                                                             <  1:359754/127‑1 (MQ=255)                                                               ggCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTggccggc                                                                                        >  3:302447/1‑148 (MQ=255)                                                               ggCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTggccggc                                                                                        >  5:296453/1‑148 (MQ=255)                                                                   ccACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTg                                                                                                                                    <  5:46415/100‑1 (MQ=255)                                                                   ccACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTg                                                                                                                                    >  6:46415/1‑100 (MQ=255)                                                                   ccACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATgg                                                                                   >  6:406825/1‑149 (MQ=255)                                                                       aGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTc                                                                               >  4:95599/1‑149 (MQ=255)                                                                               ggTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAg                                                                        >  1:174711/1‑148 (MQ=255)                                                                                gtgtGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGaa                                                                         >  4:186629/1‑146 (MQ=255)                                                                                gtgtGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGaa                                                                         <  3:186629/146‑1 (MQ=255)                                                                                 tgtgGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTaa                                                                     <  3:95599/149‑1 (MQ=255)                                                                                   tgGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGGGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCg                                                                              >  1:288249/1‑138 (MQ=255)                                                                                   tgGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCg                                                                              <  2:288249/138‑1 (MQ=255)                                                                                   tgGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAgg                                                                   <  4:81394/149‑1 (MQ=255)                                                                                   tgGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAgg                                                                   <  2:174711/149‑1 (MQ=255)                                                                                      tCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCg                                                                >  3:169704/1‑149 (MQ=255)                                                                                          gaTCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAg                                                            >  3:67413/1‑149 (MQ=255)                                                                                               aCTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGaa                                                       <  4:181791/149‑1 (MQ=255)                                                                                                cTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAg                                                      >  3:298164/1‑149 (MQ=255)                                                                                                     accaccAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCg                                                 <  6:296453/149‑1 (MQ=255)                                                                                                      ccaccaGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCgg                                                >  7:158578/1‑149 (MQ=255)                                                                                                      ccaccaGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCgg                                                >  5:145098/1‑149 (MQ=255)                                                                                                       caccaGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGc                                               >  5:220814/1‑149 (MQ=255)                                                                                                        accaGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGcc                                              >  5:263125/1‑149 (MQ=255)                                                                                                         cttctttgccgcggccgtgcgcgaccgagagcggatcgtcggcAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGcc                                              >  5:356484‑M2/44‑148 (MQ=255)                                                                                                            ctttgccgcggccgtgcgcgaccgcgagcggatcgtcggcAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTc                                                  <  6:114432‑M2/101‑1 (MQ=255)                                                                                                            ctttgccgcggccgtgcgcgaccgcgagcggatcgtcggcAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTc                                                  >  5:114432‑M2/41‑141 (MQ=255)                                                                                                              aCGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCcgacg                                          >  1:46994/1‑147 (MQ=255)                                                                                                              aCGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGaa                                        <  6:363483/149‑1 (MQ=255)                                                                                                                  CGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTg                                    >  5:406825‑M1/1‑149 (MQ=255)                                                                                                                   GACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTaa                                                                     <  8:158778‑M1/115‑1 (MQ=255)                                                                                                                   GACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTaa                                                                     >  7:158778‑M1/1‑115 (MQ=255)                                                                                                                    acgaTCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGACGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTc                                  >  5:294814/1‑149 (MQ=255)                                                                                                                        cgtgcgcgaccgcgagcggatcgtcggcAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGc                              <  6:356484‑M2/121‑1 (MQ=255)                                                                                                                           gCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGaa                                                       <  3:386667/121‑1 (MQ=255)                                                                                                                           gCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGaa                                                       >  4:386667/1‑121 (MQ=255)                                                                                                                           gCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTg                           >  7:177226/1‑149 (MQ=255)                                                                                                                           gCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTg                           >  1:161745/1‑149 (MQ=255)                                                                                                                              cgcgGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTcc                        <  6:263125/149‑1 (MQ=255)                                                                                                                                       gcACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAg               >  7:255627/1‑149 (MQ=255)                                                                                                                                       gcACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGGTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAg               >  5:326431/1‑149 (MQ=255)                                                                                                                                             ccGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGcc         <  6:294814/149‑1 (MQ=255)                                                                                                                                              cgcgGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGcc         >  1:339832/1‑148 (MQ=255)                                                                                                                                                cggcAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAg      <  8:255627‑M2/145‑1 (MQ=255)                                                                                                                                                cggcAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAg      <  4:67413‑M2/145‑1 (MQ=255)                                                                                                                                                  gcAAAGTAGTAGCCGCGCTTGGCCGAGGTGGTGCCGTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGgt    <  4:169704‑M2/147‑1 (MQ=255)                                                                                                                                                    aaaGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGtt                   <  7:131326/132‑1 (MQ=255)                                                                                                                                                    aaaGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGtt                   >  8:131326/1‑132 (MQ=255)                                                                                                                                                    aaaGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGgtgt  >  7:66245/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGGCAAAGAAGTAGCCGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGT  >  NC_002947/319097‑319392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.