New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3886896	51 (0.800)	5 (0.080)	4/244	NT	7.9%	coding (961/2118 nt)	PP_3430	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3886952	67 (1.090)					coding (905/2118 nt)	PP_3430	two‑component system sensor histidine kinase/response regulator

AAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTC  >  NC_002947/3886808‑3887097                                                                                                                                                   |                                                                                                                                                  aaGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCcgt                                                                                                                                                <  1:121240‑M2/148‑4 (MQ=255)    tacttcatttcatGGCCCATGCCGCCCGCCAACTCGCCCACCACCTCAAAACCCACACTGATGTGCATAAGAGCCTCTCCCTGACGACCAGACTCTT‑CA‑CGGTCTGCGGTGATGTCACGGCCAACCGCAGTAAGGAGACTGCCGTCaaa                                                                                                                                            >  4:257676/4‑149 (MQ=255)         catttcatGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTc                                                                                                                                        <  6:97774/148‑1 (MQ=255)                   cccATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCACCGCCTCTGCCTGACGCGCAGCCTCTTCCATCGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCaa                                                                                                                               <  1:327723/149‑1 (MQ=255)                    ccATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACg                                                                                                                             >  7:221124/1‑148 (MQ=255)                      aTGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGaaa                                                                                                                          <  7:204240/149‑1 (MQ=255)                        gccgccCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCg                                                                                                                                       <  5:82291/134‑1 (MQ=255)                        gccgccCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCg                                                                                                                                       >  6:82291/1‑134 (MQ=255)                          cgcccgccAACTGGCCCACCACCTCCATACGCTCATTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAg                                                                                                                      >  5:64403/1‑149 (MQ=255)                          cgcccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAg                                                                                                                      <  3:211913/149‑1 (MQ=255)                           gcccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAAcctgc                                                                                                                     >  8:289636/1‑146 (MQ=255)                           gcccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGt                                                                                                                     <  8:221124/149‑1 (MQ=255)                            cccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTg                                                                                                                    >  4:30659/1‑149 (MQ=255)                             ccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAg                                                                                                                      <  8:245338/146‑1 (MQ=255)                             ccgccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAg                                                                                                                      >  7:245338/1‑146 (MQ=255)                               gccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTgg                                                                                                                   >  4:122596/1‑147 (MQ=255)                               gccAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTa                                                                                                                 <  2:121240/149‑1 (MQ=255)                                  aaCTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTg                                                                                                              <  7:262379/149‑1 (MQ=255)                                         ccaccaCCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATcg                                                                                                       >  2:236873/1‑149 (MQ=255)                                             caccTCCATACGCTCTCTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGgt                                                                                                   <  3:257676/149‑1 (MQ=255)                                                  ccATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCaa                                                                                                                               >  5:196147/1‑116 (MQ=255)                                                  ccATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCaa                                                                                                                               <  6:196147/116‑1 (MQ=255)                                                     tACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAgg                                                                                           <  3:206487/149‑1 (MQ=255)                                                       cGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCg                                                                                         <  3:30659/149‑1 (MQ=255)                                                            aCTGTTGTGCATCAGCGCCTCTGCCTTACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAtct                                                                                    >  5:15730/1‑149 (MQ=255)                                                            aCTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGAtct                                                                                    <  5:80860/149‑1 (MQ=255)                                                            aCTGTTGTGCATCAGCGCCTCTGCCTGACGCACAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCgg                                                                                        <  2:331901/145‑1 (MQ=255)                                                            aCTGTTGTGCATCAGCGCCTCTGCCTGACGCACAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCgg                                                                                        >  1:331901/1‑145 (MQ=255)                                                              tgttgtGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGc                                                                                          <  4:267575/141‑1 (MQ=255)                                                              tgttgtGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGc                                                                                          >  3:267575/1‑141 (MQ=255)                                                                ttgtGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAg                                                                                <  6:64403/149‑1 (MQ=255)                                                                  gtgCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAgc                                                                               <  3:46697/148‑1 (MQ=255)                                                                       tCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTcc                                                                         >  7:104768/1‑149 (MQ=255)                                                                           cgcCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGt                                                                     <  8:193511/149‑1 (MQ=255)                                                                               tctGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCt                                                                 >  4:221507/1‑149 (MQ=255)                                                                                 tGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGATg                                                                >  2:281744/1‑148 (MQ=255)                                                                                   ccTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAgc                                                                               <  7:288390/131‑1 (MQ=255)                                                                                   ccTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAgc                                                                               >  8:288390/1‑131 (MQ=255)                                                                                    cTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCcgtcaggcagaggcgctgatgcacaacagtgagcgtatggaggtggtgggccagttggcgggcggcatgggccatgaaatgaacaac                                                            <  4:152799‑M2/149‑88 (MQ=255)                                                                                    cTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCcgtcaggcagaggcgctgatgcacaacagtgagcgtatggaggtggtgggccagttggcgggcggcatgggccatgaaatgaacaac                                                            <  3:212843‑M2/149‑88 (MQ=255)                                                                                       aCGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTgg                                                          <  1:236873/148‑1 (MQ=255)                                                                                         gcgcAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGaa                                                        >  8:317475/1‑148 (MQ=255)                                                                                         gcgcAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGaa                                                        >  1:14482/1‑148 (MQ=255)                                                                                           gcAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCcgtcaggcagaggcgctgatgcacaacagtgagcgtatggaggtggtgggccagttggcgggcggcatggg                                                                            <  3:43745‑M2/126‑72 (MQ=255)                                                                                           gcAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCcgtcaggcagaggcgctgatgcacaacagtgagcgtatggaggtggtgggccagttggcgggcggcatggg                                                                            >  4:43745‑M2/1‑55 (MQ=255)                                                                                           gcAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAg                                                     >  5:351958/1‑149 (MQ=255)                                                                                               ccTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCg                                                 <  3:122596/149‑1 (MQ=255)                                                                                                 tctT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa                                               >  7:238202/1‑149 (MQ=255)                                                                                                 tctT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa                                               >  1:51143/1‑149 (MQ=255)                                                                                                 tctT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa                                               >  7:111761/1‑149 (MQ=255)                                                                                                   tt‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGaca                                             >  8:287622/1‑149 (MQ=255)                                                                                                   tt‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGa                                               <  2:51143/147‑1 (MQ=255)                                                                                                         cGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGc                                         <  2:14482/149‑1 (MQ=255)                                                                                                            tCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAt                                                             >  5:301649/1‑126 (MQ=255)                                                                                                            tCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCAt                                                             <  6:301649/126‑1 (MQ=255)                                                                                                                     aTGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACtt                              <  7:317475/148‑1 (MQ=255)                                                                                                                        tCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCgg                           >  5:193022/1‑148 (MQ=255)                                                                                                                        tCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCgg                           >  4:238609/1‑148 (MQ=255)                                                                                                                         cccGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTa                         >  6:304871/1‑149 (MQ=255)                                                                                                                         cccGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTa                         >  6:144510/1‑149 (MQ=255)                                                                                                                          ccGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTa                         <  5:144510/148‑1 (MQ=255)                                                                                                                           cGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCgg                                                <  5:367755/124‑1 (MQ=255)                                                                                                                           cGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCgg                                                >  6:367755/1‑124 (MQ=255)                                                                                                                             gCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGTCAATCGTACTTCGGTACGct                     >  5:412299/1‑149 (MQ=255)                                                                                                                                aaCCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTg                  <  8:104768/149‑1 (MQ=255)                                                                                                                                   cgccgTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCg               >  4:316714/1‑149 (MQ=255)                                                                                                                                    gccgTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTAc                                >  8:111727/1‑131 (MQ=255)                                                                                                                                    gccgTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTAc                                <  7:111727/131‑1 (MQ=255)                                                                                                                                        tCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCgg              <  7:292202/145‑1 (MQ=255)                                                                                                                                        tCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCgg              >  8:292202/1‑145 (MQ=255)                                                                                                                                          aggaggCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCGGGTGCAc        <  5:274330/149‑1 (MQ=255)                                                                                                                                            gaggCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCGGGTGCAc        >  6:197861/1‑147 (MQ=255)                                                                                                                                             aggCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAg     <  5:197861/149‑1 (MQ=255)                                                                                                                                              ggCTGCcgtcaggcagaggcgctgatgcacaacagtgagcgtatggaggtggtgggccagttggcgggcggcatgggccatgaaatgaacaacttgctgaccggtatcggcggcagcctcgaactgctgcagcggcgcctgcaggaggg    >  3:152799‑M2/1‑6 (MQ=255)                                                                                                                                                cTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTc  <  3:221507/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                  AAGTTGTTCATTTCATGGCCCATGCCGCCCGCCAACTGGCCCACCACCTCCATACGCTCACTGTTGTGCATCAGCGCCTCTGCCTGACGCGCAGCCTCTT‑CA‑CGGTCTGCGGTGATGTCCCGGCCAACCGCCGTCAGGAGGCTGCCGTCAAACCTCGCACTCCAACGAAACCAGTGGTAGTGACCATCGCGGTGTCGCAGGCGGATCTCCAGCTGCTCCGCGTGGCTGCATTGGAACAGCCCGGACACTGCCAATCGTACTTCGGTACGCTCTGTCGGGTGCACCAGCTC  >  NC_002947/3886808‑3887097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.