New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4017940 =	52 (0.810)	3 (0.050)	3/238	NT	5.8%	coding (375/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4017980 =	49 (0.820)					coding (415/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator

CCGACATCATGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGATTTCAA  >  NC_002947/4017834‑4018122                                                                                                                                                     |                                                                                                                                                ccGACATCATGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAg                                                                                                                                               <  1:375337/149‑1 (MQ=255)    gcctccatcttctgcgcctggcgcagtgcttcttcggcctgctgcaggcgttcctgttcggtcacgcgctgcgtgatgtcataggcgaacaggtagccgccctgAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAggg                                                                                                                                             >  3:90933‑M1/105‑149 (MQ=255)     cctccatcttctgcgcctggcgcagtgcttcttcggcctgctgcaggcgttcctgttcggtcacgcgctgcgtgatgtcataggcgaacaggtagccgccctgAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGggc                                                                                                                                            >  5:78917‑M1/104‑149 (MQ=255)        catGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGggcggc                                                                                                                                         >  8:363995/1‑148 (MQ=255)          tGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTAc                                                                                                                                      <  7:363995/149‑1 (MQ=255)          tGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTAc                                                                                                                                      <  4:223805/149‑1 (MQ=255)             gccgccTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTg                                                                                                                                   >  4:292193/1‑149 (MQ=255)               cgccTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGtt                                                                                                                                 >  7:181633/1‑149 (MQ=255)                      ccccGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTAt                                                                                                                          <  8:181633/149‑1 (MQ=255)                      ccccGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTAt                                                                                                                          >  7:154241/1‑149 (MQ=255)                      ccccGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTAt                                                                                                                          >  4:90268/1‑149 (MQ=255)                       cccGATATGGCCGCGCATACTGGCAGGGGAAGGCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTAt                                                                                                                          >  1:250495/1‑149 (MQ=255)                       cccGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAgg                                                                                                                                              >  8:303837/1‑128 (MQ=255)                       cccGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAgg                                                                                                                                              <  7:303837/128‑1 (MQ=255)                        ccGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGa                                                                                                                        <  6:23715/149‑1 (MQ=255)                         cGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGAc                                                                                                                       <  8:154241/149‑1 (MQ=255)                               ggCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACg                                                                                                                 >  4:320986/1‑149 (MQ=255)                                gCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACg                                                                                                                 >  1:148555/1‑148 (MQ=255)                                       aTACTGGCAGGCGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGt                                                                                                         >  4:103933/1‑149 (MQ=255)                                          cTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGTACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCGCTGCGTGat                                                                                                      <  3:292193/149‑2 (MQ=255)                                           tGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTAc                                                                                                                                      <  8:84293/116‑1 (MQ=255)                                           tGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTAc                                                                                                                                      >  7:84293/1‑116 (MQ=255)                                           tGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGa                                                                                                                        >  6:294641/1‑130 (MQ=255)                                           tGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGa                                                                                                                        <  5:294641/130‑1 (MQ=255)                                             gCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGAcc                                                                                                     <  5:12760/147‑1 (MQ=255)                                             gCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCg                                                                                                    >  1:208649/1‑148 (MQ=255)                                                     a‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAAc                                                                                           <  3:90268/149‑1 (MQ=255)                                                     a‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAAc                                                                                           <  2:250495/149‑1 (MQ=255)                                                         gTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGcc                                                                                        >  6:174455/1‑149 (MQ=255)                                                                   acCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGc                                                                              >  8:284026/1‑149 (MQ=255)                                                                      gTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGa                                                                                                                        <  3:256600/104‑1 (MQ=255)                                                                      gTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGa                                                                                                                        >  4:256600/1‑104 (MQ=255)                                                                       tCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCgaa                                                                          <  2:208649/149‑1 (MQ=255)                                                                               gggCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCGTATGCTCCGCAGCGAATTCCGGGCGCCTACCTGTTCGCCTATGACATCACGCACCGCGTCACCGAACAGGAACGCCTGCACCAGCCCGAAGAAGCAc                                                                   >  1:102226/1‑149 (MQ=255)                                                                                     gacgacGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑cc                                                            <  5:174455/148‑1 (MQ=255)                                                                                        gacgCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCGCTGCGTGatg                                                                                                     >  6:152384/1‑103 (MQ=255)                                                                                        gacgCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCGCTGCGTGatg                                                                                                     <  5:152384/105‑3 (MQ=255)                                                                                          cgCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGgcgc                                                      <  7:284026/149‑1 (MQ=255)                                                                                             accacGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑AAGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGAGTGACCGAACAgg                                                                                              >  1:257444/1‑107 (MQ=255)                                                                                                       tACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGc                                         >  4:226117/1‑149 (MQ=255)                                                                                                       tACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGc                                         >  1:220791/1‑149 (MQ=255)                                                                                                       gccctgaattcgctgctgagcatcgagccacgggtggtagcgaattCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAgg                                          >  5:78917‑M2/47‑149 (MQ=255)                                                                                                        ccctgaattcgctgctgagcatcgagccacgggtggtagcgaattCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGc                                         >  3:90933‑M2/46‑149 (MQ=255)                                                                                                         cGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGc                                         <  2:364312/147‑1 (MQ=255)                                                                                                         cGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCgg                                       >  1:20966/1‑149 (MQ=255)                                                                                                         cGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCgg                                       >  2:19296/1‑149 (MQ=255)                                                                                                          gAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGt                                      >  2:96548/1‑149 (MQ=255)                                                                                                             aattcgctgctgagcatcgagccacgggtggtagcgaattCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTc                                     <  6:78917‑M2/108‑1 (MQ=255)                                                                                                              TTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCa                                                                    >  5:367398‑M1/1‑116 (MQ=255)                                                                                                              TTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCa                                                                    <  6:367398‑M1/116‑1 (MQ=255)                                                                                                                 GCTACCACCCGTGGCTCG‑ATCCTCAGCAGCGAATTCAGGCCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAg                               <  5:104291‑M1/149‑1 (MQ=255)                                                                                                                     ccaccCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGtt                             <  3:103933/147‑1 (MQ=255)                                                                                                                     ccaccCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGa                           <  2:148555/149‑1 (MQ=255)                                                                                                                        cccGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCa                                <  3:212770/141‑1 (MQ=255)                                                                                                                        cccGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCa                                >  4:212770/1‑141 (MQ=255)                                                                                                                              gCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCggg                   <  2:20966/148‑1 (MQ=255)                                                                                                                                tCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAAc                                                                                                 <  3:145370/69‑1 (MQ=255)                                                                                                                                tCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAAc                                                                                                 >  4:145370/1‑69 (MQ=255)                                                                                                                                  g‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGc              >  3:267187/1‑149 (MQ=255)                                                                                                                                       cTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCGCCCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGccc            <  1:96548/148‑1 (MQ=255)                                                                                                                                        tCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCAt          >  3:306364/1‑148 (MQ=255)                                                                                                                                        tCAGCAGCGAATTCAGGGCGGCTACCTGTTCGACTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTg                                                                                      >  2:175333/1‑73 (MQ=255)                                                                                                                                        tCAGCAGCGAATTCAGGGCGGCTACCTGTTCGACTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTg                                                                                      <  1:175333/73‑1 (MQ=255)                                                                                                                                           gcagcGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGAtt      <  3:320986/149‑1 (MQ=255)                                                                                                                                            cagcGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGAttt     <  2:318376/149‑1 (MQ=255)                                                                                                                                            cagcGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGAtt      >  8:284990/1‑148 (MQ=255)                                                                                                                                               cgaattCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGATTTcaa  >  1:353260‑M2/7‑149 (MQ=255)                                                                                                                                               cgaattCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGATTTcaa  <  7:284990‑M2/143‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                CCGACATCATGGGCCGCCTGGCCCCGATATGGCCGCGCATACTGGCAGGGGAA‑GCGTTCATCGACACCGTCACCTTCGGGCTGGACGACGCACCACGCCACTACGAAATTCGCTACCACCCGTGGCTCG‑ATGCTCAGCAGCGAATTCAGGGCGGCTACCTGTTCGCCTATGACATCACGCAGCGCGTGACCGAACAGGAACGCCTGCAGCAGGCCGAAGAAGCACTGCG‑CCAGGCGCAGAAGATGGAGGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGATTTCAA  >  NC_002947/4017834‑4018122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.