New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4932061 =	60 (0.940)	3 (0.050)	3/238	NT	5.4%	coding (157/741 nt)	fliA	RNA polymerase sigma 28 factor
	?	NC_002947	4932103 =	48 (0.800)					coding (115/741 nt)	fliA	RNA polymerase sigma 28 factor

GCACTTCGTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTGCACC  >  NC_002947/4931956‑4932247                                                                                                                                                    |                                                                                                                                                  gcACTTCGTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCaa                                                                                                                                                   <  5:304406/148‑1 (MQ=255)     ttCGTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAgcgcg                                                                                                                                              >  7:376555/1‑149 (MQ=255)       cGTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTTGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAgcgcgc                                                                                                                                             <  5:254856/148‑1 (MQ=255)        gTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGcc                                                                                                                                            <  3:381345/148‑1 (MQ=255)        gTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTCGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGcc                                                                                                                                            >  5:356419/1‑148 (MQ=255)         tCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCaa                                                                                                                                          >  3:73127/1‑149 (MQ=255)           cAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCaa                                                                                                                                          >  6:35412/1‑147 (MQ=255)           cAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACa                                                                                                                                        <  3:99380/149‑1 (MQ=255)                tGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAggtgg                                                                                                                                   <  6:164696/149‑1 (MQ=255)                     ccGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAggtg                                                                                                                                    >  5:37678/1‑143 (MQ=255)                     ccGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAggtg                                                                                                                                    <  6:37678/143‑1 (MQ=255)                         gAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATg                                                                                                                          <  8:204206/149‑1 (MQ=255)                             gCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCt                                                                                                                      >  5:257984/1‑149 (MQ=255)                                     cGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGc                                                                                                              >  4:251721/1‑149 (MQ=255)                                        cGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCggg                                                                                                           <  7:302192/149‑1 (MQ=255)                                              tctcAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCATGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTa                                                                                                     <  4:244642/148‑1 (MQ=255)                                               gctgatcgaacgctacgccccgctggtcaagcgcatcgcctaccacctgttggcgcgctTGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCaa                                                                                                                                                   >  3:230280‑M1/60‑102 (MQ=255)                                               gctgatcgaacgctacgccccgctggtcaagcgcatcgcctaccacctgttggcgcgctTGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCaa                                                                                                                                                   <  4:230280‑M1/43‑1 (MQ=255)                                                            cccTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTc                                                                                      >  8:216669/1‑149 (MQ=255)                                                                     gCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTgg                                                                               <  6:356419/147‑1 (MQ=255)                                                                       gtcgtATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGt                                                                           >  5:63296/1‑149 (MQ=255)                                                                           tATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCtt                                                                       >  7:145722/1‑149 (MQ=255)                                                                           tATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCtt                                                                       >  5:63332/1‑149 (MQ=255)                                                                             tttGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTcg                                                                     >  2:45962/1‑149 (MQ=255)                                                                             tttGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTcg                                                                     >  1:36845/1‑149 (MQ=255)                                                                             tttGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTc                                                                      <  8:145722/148‑1 (MQ=255)                                                                               tgttgGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTcgc                                                                    <  6:257984/148‑1 (MQ=255)                                                                                   ggCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGAGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCgccgcc                                                                <  3:196164/148‑1 (MQ=255)                                                                                      cACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGc                                                                                                         <  3:260309/105‑1 (MQ=255)                                                                                      cACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGc                                                                                                         >  4:260309/1‑105 (MQ=255)                                                                                         ttCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTgg                                                                               <  5:242096/127‑1 (MQ=255)                                                                                         ttCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTgg                                                                               >  6:242096/1‑127 (MQ=255)                                                                                           ccAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGt                                                         <  6:332127/147‑1 (MQ=255)                                                                                            cagcagGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTAc                                                       <  3:251721/148‑1 (MQ=255)                                                                                               cagGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCt                                                   >  5:303149/1‑149 (MQ=255)                                                                                                       tCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCg                                           <  4:73127/149‑1 (MQ=255)                                                                                                         ttgccggccaacgtgcaggtcgaggacctgatccaggccggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGc                                                                                        <  4:230280‑M2/59‑1 (MQ=255)                                                                                                         ttgccggccaacgtgcaggtcgaggacctgatccaggccggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGc                                                                                        >  3:230280‑M2/44‑102 (MQ=255)                                                                                                         aTGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCt                                         >  5:371076/1‑149 (MQ=255)                                                                                                            CCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCg                                                                                              >  4:408091‑M1/1‑93 (MQ=255)                                                                                                            CCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCg                                                                                              <  3:408091‑M1/93‑1 (MQ=255)                                                                                                             cggccaacgtgcaggtcgaggacctgatccaggccggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCg                                     >  2:155198‑M2/40‑149 (MQ=255)                                                                                                             CGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGctgggg                                     <  5:109898‑M1/149‑3 (MQ=255)                                                                                                                 CTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGGGTTCa                                 >  6:109898‑M1/1‑149 (MQ=255)                                                                                                                 CTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCa                                 >  6:371076‑M1/1‑149 (MQ=255)                                                                                                                 CTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCa                                 <  8:215854‑M1/149‑1 (MQ=255)                                                                                                                      tCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGCCCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTa                            <  7:216669/149‑1 (MQ=255)                                                                                                                       cAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTAc                           >  3:35968/1‑149 (MQ=255)                                                                                                                        aGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACg                          >  8:291192/1‑149 (MQ=255)                                                                                                                         ggTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATc                                                    >  1:124267/1‑122 (MQ=255)                                                                                                                         ggTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATc                                                    <  2:124267/122‑1 (MQ=255)                                                                                                                         ggTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCtt                                                  >  6:236878/1‑124 (MQ=255)                                                                                                                         ggTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCtt                                                  <  5:236878/124‑1 (MQ=255)                                                                                                                              tCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACgg                         >  4:57416/1‑144 (MQ=255)                                                                                                                              tCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACgg                         <  3:57416/144‑1 (MQ=255)                                                                                                                                gACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCcgc                  >  2:385118/1‑149 (MQ=255)                                                                                                                                  ccTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCgcgc                >  8:178248/1‑149 (MQ=255)                                                                                                                                    tGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCATCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtg              >  1:10920/1‑149 (MQ=255)                                                                                                                                     gCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtgg             >  7:278677/1‑149 (MQ=255)                                                                                                                                      cACGTTGGCCGGCAAGCGCGCCAACAGGTGGTACGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtggt            <  7:226710/149‑1 (MQ=255)                                                                                                                                       aCGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtggtg           <  8:376555/149‑1 (MQ=255)                                                                                                                                       aCGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtggtg           <  7:291192/149‑1 (MQ=255)                                                                                                                                         gTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTggg         >  4:209222/1‑149 (MQ=255)                                                                                                                                          ttGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCATCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGt        <  2:10920/149‑1 (MQ=255)                                                                                                                                             gccggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTg      >  3:307607‑M2/8‑148 (MQ=255)                                                                                                                                             gccggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTg      >  1:406069‑M2/8‑148 (MQ=255)                                                                                                                                              ccggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGCTGTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTGc     >  1:302275‑M2/7‑149 (MQ=255)                                                                                                                                               cggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtggtgg          >  5:132428‑M2/6‑142 (MQ=255)                                                                                                                                               cggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCtggtgg          <  6:132428‑M2/137‑1 (MQ=255)                                                                                                                                               cggcaAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTGCAc   <  6:303149‑M2/144‑1 (MQ=255)                                                                                                                                                  caAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTGCAcc  >  3:227310‑M2/3‑147 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCACTTCGTCCAGCATGGCCCCGCGAATGCGGATGCCGGCGTAGGTCTCAAAGCTGGCGCCCTTGCTGGCGTCGTATTTGTTGGCCACTTCCAGCAGGCCGATCATGCCGGCCTGGATCAGGTCCTCGACCTGCACGTTGGCCGGCAAGCGCGCCAACAGGTGGTAGGCGATGCGCTTGACCAGCGGGGC‑GTAGCGTTCGATCAGCTCGTACTGGGCGTCCTTCGCCGCCCGGCTGTACATCTTGAAGCCGCTGGCGTTCATAGTACGGGTCCCGCGCTGGTGGGTTGCACC  >  NC_002947/4931956‑4932247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.