New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1499458	36 (0.550)	13 (0.200)	9/270	6.5	30.1%	intergenic (+35/‑129)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499495	25 (0.390)					intergenic (+72/‑92)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
Rejected: Coverage evenness skew score above cutoff.

GGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1499310‑1499458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCACCGGCAAAGCCGTGGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGAACT  <  NC_002947/1499495‑1499350                                                                                                                                                                                                                                                                                                          GGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGA                                                                                                                                                      <  5:354843/148‑1                                             CGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCG                                                                                                         <  6:133829/148‑1                                                                      GCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGG                                                                                                        >  3:293466/1‑124                                                                      GCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGG                                                                                                        <  4:293466/124‑1                                                                                                                           gtctGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCA                           >  1:308303/5‑149                                                                                                                           gtctGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCGGCGGTGGTGGCAA                                                       >  3:69026/5‑120                                                                                                                              tGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCAC                       >  5:1435/2‑149                                                                                                                                TGGGAGCGGGCGTGCCCGCTAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACG                      <  2:100375/148‑1                                                                                                                                  ggcggGGGGGTGCCCGCGAACACCGGCAACGCGGGGGCCTTGCACCGCGGCGACT‑GTTGGGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCGGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGC                   <  5:289016/144‑1                                                                                                                                  GGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGATGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGC                   <  1:74017/149‑1                                                                                                                                              CCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCA                                            >  7:117129/1‑112                                                                                                                                              CCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCA                                            <  8:117129/112‑1                                                                                                                                               CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCG      <  8:359346/149‑1                                                                                                                                                  gcAACACCGGCAACGCGGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTTGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCCCATCACTGGCTTCAGCGTTGTCGAAC   <  1:11437/147‑1                                                                                                                                                   GAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGAACT  <  6:367781/149‑1                                                                                                                                                                                                                                                                                                          GGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1499310‑1499458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCACCGGCAAAGCCGTGGCCATGCACCGCGGCGCCT‑GTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGAACT  <  NC_002947/1499495‑1499350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.