| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1499458 | 36 (0.550) | 13 (0.200) | 9/270 | 6.5 | 30.1% | intergenic (+35/‑129) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947 | = 1499495 | 25 (0.390) | intergenic (+72/‑92) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGT‑T‑‑TCGGGCACG‑CCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGC > NC_002947/1499324‑1499604 | tGGCGAGCAGGTTCCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGt < 3:355310/149‑1 (MQ=255) ccGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGc < 2:316208/148‑1 (MQ=255) cGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGc > 7:311688/1‑136 (MQ=255) cGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGc < 8:311688/136‑1 (MQ=255) cGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCtt > 8:87112/1‑149 (MQ=255) ggCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCg < 7:87112/149‑1 (MQ=255) aGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGt‑tc > 6:367781/1‑148 (MQ=255) gTTCGACAACGCTGAAGCCAGTGATGGGGCCATTCAGAGCCTGAACGAAGCCTTGGCACAACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCCGCGTTGCCGGTGt‑tgc > 1:11437/1‑147 (MQ=37) cGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGt‑tcgcgg > 8:359346/1‑144 (MQ=255) gCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCATCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTcc > 1:74017/1‑149 (MQ=25) gCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACCGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCCCAA‑CAGTCGCCGCGGTGCAAGGCCCCCGCGTTGCCGGTGT‑TC‑GCGGGCAcc‑cccccgcc > 5:289016/1‑143 (MQ=255) cGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TA‑GCGGGCACGCCCGCTCCca > 2:100375/1‑148 (MQ=25) gTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCcaca < 5:1435/149‑1 (MQ=21) tGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACCAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGAc < 1:308303/149‑1 (MQ=21) gCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCAt > 2:156564/1‑98 (MQ=255) gCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCAt < 1:156564/98‑1 (MQ=255) aaTTCATAGCCTTAACCAAGCCTTGGAACCACACCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCTAAA‑AAGGCGCCGCGGTGCAGGGCACCGGCTTGGCCGGTTTGC‑‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGc < 2:11437/148‑1 (MQ=18) gagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGc > 3:249591/1‑104 (MQ=255) gagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGc < 4:249591/104‑1 (MQ=255) ccTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCg > 8:89542/1‑149 (MQ=21) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCAAAGCCGgtgc < 1:50548/104‑2 (MQ=25) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCAAAGCCGgtgc > 2:50548/1‑103 (MQ=25) aaCGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGc < 7:89542/148‑1 (MQ=21) gAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCCCCCAA‑CACGCGCCCCCGTGCAATGCACCCGCGTTGGCGGTGT‑TA‑GCGGGCCCGCCCCCACCCCCAGACAGATTTCCCATTAACCGGGcta > 8:15027/1‑146 (MQ=255) aaGCCTTGCCACCACAGCTGGACTTCGGCTCCCAAACGGTGGGAGCGGGCGTCCCCGCGAAA‑CAGGCGCCGGGGTGCATGGCACGGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATc < 7:324099/149‑1 (MQ=21) ttGCCACCACCGCCGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGAc < 3:69026/120‑1 (MQ=14) gCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TCGTCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACa < 1:100375/148‑1 (MQ=25) accacAGCAGGACTGAGGCTGCCAAACGGTGGGAGCAGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGa > 7:204099/1‑149 (MQ=21) aGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttttt < 7:359346/147‑1 (MQ=21) gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGTCTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttttt < 1:91240/145‑1 (MQ=21) gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttttt > 2:91240/1‑145 (MQ=21) cTGCCAAACGGGGGGAGCGGGCGTGCCCGCGAAA‑CCCGCGCCGCGGTGCCTGGCACCGGGGTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGc < 5:367781/149‑1 (MQ=21) aaCGGTGGGAGCGGGCGGGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGc < 3:353454/129‑1 (MQ=18) aCGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACGGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACa < 5:71002/120‑1 (MQ=17) gTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TA‑ACGGGCACGCCCGCGCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAc > 7:347154/1‑148 (MQ=25) cccGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGAACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCt < 2:312896/148‑1 (MQ=37) ccGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTAt > 6:214450/1‑94 (MQ=17) ccGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTAt < 5:214450/94‑1 (MQ=17) cgcgAAA‑CAGGCGCCGCGGTGCCTGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttt > 7:246076/1‑115 (MQ=21) cgcgAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttt < 8:246076/115‑1 (MQ=21) gcgAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTttgtt > 3:66978/1‑119 (MQ=21) gcgAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTttgtt < 4:66978/119‑1 (MQ=21) cgAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGaa < 7:15027/149‑1 (MQ=37) aa‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACGCCCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGc > 6:303859/1‑149 (MQ=37) | TGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGT‑T‑‑TCGGGCACG‑CCGCTCCCACAGACTGA‑TTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGC > NC_002947/1499324‑1499604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |