| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 839749 = | 58 (0.810) | 3 (0.040) | 3/252 | NT | 5.1% | noncoding (72/75 nt) | PP_t69 | tRNA‑Gln |
| ? | NC_002947 | 839822 = | 57 (0.850) | intergenic (‑2/+19) | PP_t69/ispE | tRNA‑Gln/4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase | |||||
AGGAAGCAATGTTTCGATGTTGCATCGTAAGCTGCAAAGTCTGGTCAAGAAGTCGAGCGCATGAGCGTTCGCAGCAACAGATACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCCGCCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/839904‑839749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccctgTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCGGCTT > NC_002947/839822‑839965 AGGAAGCAATGTTTCGATGTTGCATCGTAAGCTGCAAAGTCTGGTCAAGAAGTCGAGCGCATGAGCGTTCGCAGCAACAGATACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCC < 3:374189/149‑1AGGAAGCAATGTTTCGATGTTGCATCGTAAGCTGCAAAGTCTGGTCAAGAAGTCGAGCGCATGAGCGTTCGCAGCAACAGATACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCC > 5:439695/1‑149 GCAATGTTTCGATGTTGCATCGTAAGCTGCAAAGTCTGGTCAAGAAGTCGAGCGCATGAGCGTTCGCAGCAACAGATACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCCGCCCC < 3:182302/149‑1 TACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCCGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACA > 3:272751/1‑149 ACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCCGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACAT > 3:218071/1‑149 GCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCCGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTG < 4:218071/149‑1 ccgTGTATCTGTTGCTGCGAACGCTCATGCGCTGGACTTATTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACGCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCGGCTT < 4:52560/146‑1 CCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCAAGAACTTTATCAGCTTAGCCTT > 3:52560/1‑149 GTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACC > 3:38709/1‑97 GTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACC < 4:38709/97‑1 AGGAAGCAATGTTTCGATGTTGCATCGTAAGCTGCAAAGTCTGGTCAAGAAGTCGAGCGCATGAGCGTTCGCAGCAACAGATACAGGGGCGTCGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGCCATGCGTTGGTTCGAATCCAGCCGCCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/839904‑839749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccctgTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCGGCTT > NC_002947/839822‑839965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |