New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	839749 =	58 (0.810)	3 (0.040)	3/252	NT	5.1%	noncoding (72/75 nt)	PP_t69	tRNA‑Gln
	?	NC_002947	839822 =	57 (0.850)					intergenic (‑2/+19)	PP_t69/ispE	tRNA‑Gln/4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase

CGACAGAGACGTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATC  >  NC_002947/839601‑839889                                                                                                                                                     |                                                                                                                                              cGACAGAGACGTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGc                                                                                                                                               <  3:359144/149‑1 (MQ=255)   aCAGAGACGTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAg                                                                                                                                             >  4:381650/1‑149 (MQ=255)     aaggctaagctgataaagttcttgcccttctttcagcgacccaaacagggtttgtggccaaaggaagcaatgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagataCAggg                                                                                                                                           >  3:52560‑M1/145‑149 (MQ=255)     aagccgaagctgataaagttctggcccttctttcagcgacccaaacagcgtttgtggccaaaggaagcaatgtttcgatgttgcatcgtaagctgcaaagtctggtcaataagtccagcgcatgagcgttcgcagcaacagatacacgg                                                                                                                                           <  4:52560‑M1/5‑4 (MQ=255)       agaCGTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGggc                                                                                                                                         >  3:103146/1‑149 (MQ=255)           gTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCt                                                                                                                                     >  7:202001/1‑149 (MQ=255)           gTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCt                                                                                                                                     >  2:352/1‑149 (MQ=255)             cACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACCCGCGCAGTACCTGAAGGGTGAGGGTATACCTGGATGAGTGTAAGGATAATGGGAGGGGGGGGTgg                                                                                                                                   >  8:325339/1‑149 (MQ=255)                cgtcagGGCTCTGCAGCTGACGTACGACACGCCGAGACAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGAtt                                                                                                                                <  8:395250/145‑1 (MQ=255)                   gagGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTATCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGa                                                                                                                             <  6:128045/149‑1 (MQ=255)                     gggATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAAc                                                                                                                           <  1:352/149‑1 (MQ=255)                      ggATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAAc                                                                                                                           >  2:304126/1‑148 (MQ=255)                               gCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATgg                                                                                                                 <  1:14487/149‑1 (MQ=255)                                 tGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATgg                                                                                                                 >  3:52025/1‑147 (MQ=255)                                   aCGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAg                                                                                                              >  5:352389/1‑148 (MQ=255)                                     gTACGACACGCCGAGCCAGATCGGGGTTAGCTTTCCCAGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCAGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAt                                                                                                           >  8:116733/1‑149 (MQ=255)                                     gTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAt                                                                                                           <  7:116809/149‑1 (MQ=255)                                      tACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑c                                                                                                         <  4:103146/149‑1 (MQ=255)                                      tACGACACGCCGAGCCAGATCGGGGGTAGCGCTCCCCGTAAATACCATCATCTTGGACACGCGCAGTACCTGAAGGCGGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑c                                                                                                         <  6:430775/149‑1 (MQ=255)                                         gACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑Caaa                                                                                                      <  4:52025/149‑1 (MQ=255)                                           cacGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCACTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCAAACAAACGCATGGCATGAT‑CAAAAc                                                                                                    >  1:310706/1‑149 (MQ=255)                                              gCCGAGCCAGATCGGGGTTAGCGTTCCGCGTATAGACGATGATCTTGGACACGCGCAGTCCCTGAAGGCTGAGGTTATAGCTGGATGAGTTTAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGCAT‑CAACACctg                                                                                                 >  6:384291/1‑149 (MQ=37)                                              gCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACctg                                                                                                 >  2:355759/1‑149 (MQ=255)                                              gCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACctg                                                                                                 >  5:66780/1‑149 (MQ=255)                                                cGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACctgct                                                                                               >  3:96947/1‑149 (MQ=255)                                                cGAGACATATCTGGTTTAGCTTTCCCCGTAATTACCATCATCTTGGACACGCGCATTACCTTAATGCTGAGGGTATACATGGATGAGTATAAGGAAAATTGCAGGGGGGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACctgct                                                                                               <  8:385194/149‑1 (MQ=25)                                                     ggtttgtggccaaaggaagcaatgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagatac                                                                                                                                               <  4:38709‑M1/1‑1 (MQ=255)                                                     ggtttgtggccaaaggaagcaatgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagatac                                                                                                                                               >  3:38709‑M1/97‑97 (MQ=255)                                                     cAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCt                                                                                           >  7:182179/1‑148 (MQ=255)                                                               caaaggaagcaatgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagataCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGc                                                                                <  4:218071‑M1/63‑1 (MQ=255)                                                                    gTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGAATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGc                                                                           <  1:355759/149‑1 (MQ=255)                                                                     ttCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGcc                                                                          >  2:398091/1‑149 (MQ=255)                                                                          cGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGt                                                                     <  7:116733/149‑1 (MQ=255)                                                                          atgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagataCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGt                                                                     >  3:218071‑M1/76‑149 (MQ=255)                                                                           tgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagataCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTa                                                                    >  3:272751‑M1/75‑149 (MQ=255)                                                                              aaGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATc                                                                  <  8:182179/148‑1 (MQ=255)                                                                                  ccATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CTAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTtg                                                             <  1:304126/149‑1 (MQ=255)                                                                                   catcatCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATTCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTtgc                                                            >  8:261761/1‑149 (MQ=255)                                                                                    atcatcTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTtgct                                                           <  7:325339/149‑1 (MQ=255)                                                                                      catcTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGc                                                                           <  5:184564/131‑1 (MQ=255)                                                                                      catcTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGc                                                                           >  6:184564/1‑131 (MQ=255)                                                                                        tcTTGGACACGCGCAGTGCCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCtgctgc                                                                                             >  4:8132/1‑111 (MQ=255)                                                                                        tcTTGGACACGCGCAGTGCCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCtgctgc                                                                                             <  3:8132/111‑1 (MQ=255)                                                                                                acGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAgcgcatga                                               <  5:358850/149‑5 (MQ=255)                                                                                                   cgcAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATgcg                                            <  6:352389/149‑1 (MQ=255)                                                                                                            tGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                   >  7:188229/1‑149 (MQ=255)                                                                                                            tGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                   >  4:182593/1‑149 (MQ=255)                                                                                                             gAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                   <  7:70824/148‑1 (MQ=255)                                                                                                             gAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                   >  8:70824/1‑148 (MQ=255)                                                                                                               aGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtctt                                 <  6:228160/148‑1 (MQ=255)                                                                                                                 gCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGAc                              <  1:175813/149‑1 (MQ=255)                                                                                                                   tGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGAc                              >  8:153444/1‑147 (MQ=255)                                                                                                                   tGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGAc                              >  6:439695/1‑147 (MQ=255)                                                                                                                     aGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGATCCAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTg                                                                <  1:84412/112‑1 (MQ=255)                                                                                                                     aGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTg                                                                >  2:84412/1‑111 (MQ=255)                                                                                                                     aGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTACCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGa                          >  6:121287/1‑149 (MQ=255)                                                                                                                         tataCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACttt                      <  1:295652/149‑1 (MQ=255)                                                                                                                          ataCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtct                                  <  6:188083/136‑1 (MQ=255)                                                                                                                          ataCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtct                                  >  5:188083/1‑136 (MQ=255)                                                                                                                            aCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTg                     >  1:409772/1‑147 (MQ=255)                                                                                                                             ccTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAg                  >  2:113876/1‑149 (MQ=255)                                                                                                                               tGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGGGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCt                >  5:375827/1‑149 (MQ=255)                                                                                                                                    gAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACg            <  4:96947/148‑1 (MQ=255)                                                                                                                                         taAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCa       >  7:60777/1‑148 (MQ=255)                                                                                                                                          aaGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGa                          >  4:104217/1‑128 (MQ=255)                                                                                                                                          aaGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGa                          <  3:104217/128‑1 (MQ=255)                                                                                                                                             gAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATc  >  7:247844/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                              CGACAGAGACGTCACCGAGAGGGATATGCAGCTGACGTACGACACGCCGAGCCAGATCGGGGTTAGCGTTCCCCGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATC  >  NC_002947/839601‑839889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.