New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	839749 =	58 (0.810)	3 (0.040)	3/252	NT	5.1%	noncoding (72/75 nt)	PP_t69	tRNA‑Gln
	?	NC_002947	839822 =	57 (0.850)					intergenic (‑2/+19)	PP_t69/ispE	tRNA‑Gln/4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase

CGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCGGCTT  >  NC_002947/839674‑839965                                                                                                                                                       |                                                                                                                                                cGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGt                                                                                                                                                 <  7:116733/149‑1 (MQ=255) atgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagataCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGt                                                                                                                                                 >  3:218071‑M1/76‑149 (MQ=255)  tgtttcgatgttgcatcgtaagctgcaaagtctggtcaagaagtcgagcgcatgagcgttcgcagcaacagataCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTa                                                                                                                                                >  3:272751‑M1/75‑149 (MQ=255)     aaGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATc                                                                                                                                              <  8:182179/148‑1 (MQ=255)         ccATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CTAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTtg                                                                                                                                         <  1:304126/149‑1 (MQ=255)          catcatCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATTCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTtgc                                                                                                                                        >  8:261761/1‑149 (MQ=255)           atcatcTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTtgct                                                                                                                                       <  7:325339/149‑1 (MQ=255)                       acGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAgcgcatga                                                                                                                           <  5:358850/149‑5 (MQ=255)                          cgcAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATgcg                                                                                                                        <  6:352389/149‑1 (MQ=255)                                   tGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                                                                                               >  7:188229/1‑149 (MQ=255)                                   tGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                                                                                               >  4:182593/1‑149 (MQ=255)                                    gAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                                                                                               >  8:70824/1‑148 (MQ=255)                                    gAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtc                                                                                                               <  7:70824/148‑1 (MQ=255)                                      aGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtctt                                                                                                             <  6:228160/148‑1 (MQ=255)                                        gCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGAc                                                                                                          <  1:175813/149‑1 (MQ=255)                                          tGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGAc                                                                                                          >  6:439695/1‑147 (MQ=255)                                          tGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGAc                                                                                                          >  8:153444/1‑147 (MQ=255)                                            aGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGATCCAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTg                                                                                                                                            <  1:84412/112‑1 (MQ=255)                                            aGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTg                                                                                                                                            >  2:84412/1‑111 (MQ=255)                                            aGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTACCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGa                                                                                                      >  6:121287/1‑149 (MQ=255)                                                tataCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACttt                                                                                                  <  1:295652/149‑1 (MQ=255)                                                 ataCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtct                                                                                                              >  5:188083/1‑136 (MQ=255)                                                 ataCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGActtct                                                                                                              <  6:188083/136‑1 (MQ=255)                                                   aCCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTg                                                                                                 >  1:409772/1‑147 (MQ=255)                                                    ccTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAg                                                                                              >  2:113876/1‑149 (MQ=255)                                                      tGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGGGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCt                                                                                            >  5:375827/1‑149 (MQ=255)                                                           gAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACg                                                                                        <  4:96947/148‑1 (MQ=255)                                                                taAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCa                                                                                   >  7:60777/1‑148 (MQ=255)                                                                 aaGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGa                                                                                                      >  4:104217/1‑128 (MQ=255)                                                                 aaGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGa                                                                                                      <  3:104217/128‑1 (MQ=255)                                                                    gAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATc                                                                              >  7:247844/1‑149 (MQ=255)                                                                            tacaggggcgtcgccaagcggtaaggcagcaggttttgatcctgccatgcgttggttcgaatccagccgcccctgTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACa                                                                        >  3:272751‑M2/76‑149 (MQ=255)                                                                             acaggggcgtcgccaagcggtaaggcagcaggttttgatcctgccatgcgttggttcgaatccagccgcccctgTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACAt                                                                       >  3:218071‑M2/75‑149 (MQ=255)                                                                              GGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGc                                                                    <  3:182302‑M1/149‑1 (MQ=255)                                                                                   GGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCt                                                               <  3:374189‑M1/149‑1 (MQ=255)                                                                                   GGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCt                                                               >  5:439695‑M1/1‑149 (MQ=255)                                                                                    gcTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTTAACCGCTTGGCGACGCCCCTGTATCTGTtgctgc                                                                                                                                     <  1:58410/79‑1 (MQ=255)                                                                                    gcTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTtgctgc                                                                                                                                     >  2:58410/1‑78 (MQ=255)                                                                                     cTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCttt                                                             <  7:153444/149‑1 (MQ=255)                                                                                        gccaagcggtaaggcagcaggttttgatcctgccatgcgttggttcgaatccagccgcccctgTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTg                                                            <  4:218071‑M2/86‑1 (MQ=255)                                                                                        gATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTACCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGc                                                          <  5:121287/149‑1 (MQ=255)                                                                                          ttCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCca                                                        <  8:247844/149‑1 (MQ=255)                                                                                          ttCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGAGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCca                                                        >  3:51957/1‑149 (MQ=255)                                                                                              aaCCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACaaa                                                    >  3:245706/1‑149 (MQ=255)                                                                                                ccAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAAcc                                                  <  3:381650/149‑1 (MQ=255)                                                                                                  aaCGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCt                                                >  8:323038/1‑149 (MQ=255)                                                                                                   aCGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTg                                               >  7:19207/1‑149 (MQ=255)                                                                                                    cGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGt                                              >  8:401703/1‑149 (MQ=255)                                                                                                       aTGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCaa                                                                                  <  1:433819/110‑1 (MQ=255)                                                                                                       aTGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCaa                                                                                  >  2:433819/1‑110 (MQ=255)                                                                                                          gCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGt                                        >  7:150016/1‑149 (MQ=255)                                                                                                              gAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCt                                    <  6:375827/149‑1 (MQ=255)                                                                                                                t‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGa                                  <  4:374189/149‑1 (MQ=255)                                                                                                                  cAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGa                                  >  4:56541/1‑148 (MQ=255)                                                                                                                   aaaaCCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGaaa                                >  7:243037/1‑149 (MQ=255)                                                                                                                   aaaaCCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGaa                                 <  3:182593/148‑1 (MQ=255)                                                                                                                    aaaCCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGa                                  >  2:425233/1‑146 (MQ=255)                                                                                                                       ccTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGc                                                                                                <  7:386491/81‑1 (MQ=255)                                                                                                                       ccTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGc                                                                                                >  8:386491/1‑81 (MQ=255)                                                                                                                       ccTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAaagaag                            <  2:409772/149‑1 (MQ=255)                                                                                                                         tgctgcCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAggg                          >  7:291400/1‑149 (MQ=255)                                                                                                                           ctgcCTT‑CCCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTTAAAGAAGGGc                         <  3:56541/148‑1 (MQ=255)                                                                                                                             gcCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGc                         >  3:332617/1‑146 (MQ=255)                                                                                                                                tt‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAAc                   >  1:17917/1‑149 (MQ=255)                                                                                                                                   aCCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTgg                                          <  1:428967/124‑1 (MQ=255)                                                                                                                                   aCCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTgg                                          >  2:428967/1‑124 (MQ=255)                                                                                                                                       cTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTaa              >  6:339431/1‑147 (MQ=255)                                                                                                                                             gACGCCCCTGTATCTTTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTTCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTc       <  8:202001/149‑1 (MQ=255)                                                                                                                                             gACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTc       >  8:201598/1‑149 (MQ=255)                                                                                                                                             gACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTc       >  7:31562/1‑149 (MQ=255)                                                                                                                                              aCGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCg      <  7:261761/149‑1 (MQ=255)                                                                                                                                                  ccgtgTATCTGTTGCTGCGAACGCTCATGCGCTGGACTTATTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACGCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCGGCtt  <  4:52560‑M2/144‑1 (MQ=255)                                                                                                                                                  ccctgTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCAAGAACTTTATCAGCTTAGCCtt  >  3:52560‑M2/6‑149 (MQ=255)                                                                                                                                                      gTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAAcc                                                  >  3:38709‑M2/2‑97 (MQ=255)                                                                                                                                                      gTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAAcc                                                  <  4:38709‑M2/96‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                CGTAAAGACCATCATCTTGGACACGCGCAGTACCTGAAGGCTGAGGGTATACCTGGATGAGTATAAGGAAAATGGCAGGGGCGGCTGGATTCGAACCAACGCATGGCAGGAT‑CAAAACCTGCTGCCTT‑ACCGCTTGGCGACGCCCCTGTATCTGTTGCTGCGAACGCTCATGCGCTCGACTTCTTGACCAGACTTTGCAGCTTACGATGCAACATCGAAACATTGCTTCCTTTGGCCACAAACCCTGTTTGGGTCGCTGAAAGAAGGGCCAGAACTTTATCAGCTTCGGCTT  >  NC_002947/839674‑839965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.