| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1084438 | 77 (1.070) | 6 (0.090) | 4/248 | NT | 7.1% | coding (263/852 nt) | PP_0939 | carbon‑nitrogen hydrolase family protein |
| ? | NC_002947 | = 1084501 | 87 (1.310) | coding (326/852 nt) | PP_0939 | carbon‑nitrogen hydrolase family protein | |||||
GCGGTGCTGCCGGAAAACTTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1084281‑1084438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgccgccACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGGCCCTTCC < NC_002947/1084501‑1084355 GCGGTGCTGCCGGAAAACTTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCC < 3:305158/149‑1GCGGTGCTGCCGGAAAACTTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCC < 4:182943/149‑1 CCGGAAAACTTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCC > 3:312278/1‑149 CCGGAAAACTTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGC < 6:67728/148‑1 CCGGAAAACTTTGCCGACATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGAGGTTGAAACTCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCCGTACTATGCCCTTCCCGC > 3:42240/1‑148 TTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTT > 6:435128/1‑134 TTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTT < 5:435128/134‑1 CCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGTAGGGGCCATCCTGCCGTGGTTGTAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCTCC < 5:394930/133‑1 GCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCCACCTCGCCGTGTTCATCGACCAG > 2:273206/1‑149 TTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCC > 4:213294/1‑148 GGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCATGCATGGGCCTTGGCATCGGGATGGCCGAACGG < 1:273206/149‑1 CCATCCTGCCGTGGTTGAAACTCACCTCCCGCGACCTCAAGTTTTGGATTGTTGCCGGTACTTTGCCCTTGCCGCCACCTCGGCGTGTTCATCGAGGAGCAGGGAGCAGGCATGTGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGG < 4:42240/149‑1 CCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGG < 3:213294/149‑1 CCATCATGCCGTTGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGG < 4:255510/149‑1 CTTGCCGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGG > 4:312278/1‑149 TTGCCGCCACCTCGCCGTGGTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGGC > 1:438032/1‑149 GCCGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGGC < 7:14621/147‑1 CGCCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGGCCCTT > 3:29479/1‑149 CCACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGGCCCTTCC < 3:13553/149‑1 GCGGTGCTGCCGGAAAACTTTGCCGCCATGGGGCGCAAGGACGCTGCTGCCATCGGCCGCGCCGAAGCCTTGGGGGAAGGGCCCATCCTGCCGTGGTTGAAACGCACCGCCCGCGACCTCAAGTTATGGATTGTTGCCGGTACTTTGCCCTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1084281‑1084438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgccgccACCTCGCCGTGTTCATCGACCAGCAGCGAGCACGCATGGGCCTTGGCATCGGGATGGCCGAACGGCGGCAAGGGCAAAGTACCGGCAACAATCCATAACTTGAGGTCGCGGGCGGTGCGTTTCAACCACGGCAGGATGGGCCCTTCC < NC_002947/1084501‑1084355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |