| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1265262 = | 85 (1.190) | 4 (0.060) | 4/254 | NT | 5.0% | coding (158/1017 nt) | PP_1106 | hypothetical protein |
| ? | NC_002947 | 1265302 = | 70 (1.030) | coding (118/1017 nt) | PP_1106 | hypothetical protein | |||||
ACGCACCGGCAATGGCCATTATCTGACCGCCAGCCCCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1265303‑1265262‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTACCC > NC_002947/1265302‑1265447 ACGCACCGGCAATGGCCATTATCTGACCGCCAGCCCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGAT > 3:158760/1‑148ACGCACCGGCAATGGCCATTATCTGACCGCCAGCCCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGAT < 4:158760/148‑1 GCACCGGCAATGGCCATTATCTGACCGCCAGCCCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGAC > 6:279753/1‑149 ATTATCTGACCGCCAGCCCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACG < 5:279753/149‑1 CCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGT > 4:343135/1‑148 CGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTA > 4:75782/1‑149 TGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTACCC < 2:148711/149‑1 ACGCACCGGCAATGGCCATTATCTGACCGCCAGCCCCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1265303‑1265262‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTACCC > NC_002947/1265302‑1265447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |