New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1265262 =85 (1.190)4 (0.060) 4/254 NT 5.0% coding (158/1017 nt) PP_1106 hypothetical protein
?NC_002947 1265302 = 70 (1.030)coding (118/1017 nt) PP_1106 hypothetical protein

CCCGGCCGGGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTACCC  >  NC_002947/1265156‑1265447
                                                                                                                                                   |                                                                                                                                                 
atcgcccgccccgaaggcctgtactgcccgcccggagatttctacatcgacccctggcggcccgtggagcgggctgtcattacccatggccacggcgaccacgcacGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGgtgcgt                                                                                                                                                  <  4:158760‑M1/42‑1 (MQ=255)
atcgcccgccccgaaggcctgtactgcccgcccggagatttctacatcgacccctggcggcccgtggagcgggctgtcattacccatggccacggcgaccacgcacGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGgtgcgt                                                                                                                                                  >  3:158760‑M1/107‑148 (MQ=255)
 ccggccggGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGgtgcgtgc                                                                                                                                                >  6:171424/1‑149 (MQ=255)
  cggccggGTGCAGGGTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGtgcgtgcg                                                                                                                                               >  7:368949/1‑149 (MQ=255)
  cggccggGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGtgcgtgcg                                                                                                                                               <  4:35972/149‑1 (MQ=255)
  cggccggGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGtgcgtgcg                                                                                                                                               <  1:427740/149‑1 (MQ=255)
    gccggGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGcgtgcgtg                                                                                                                                             <  3:265039/149‑1 (MQ=255)
      cggGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGt                                                                                                                                           >  3:100043/1‑149 (MQ=255)
               gCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGc                                                                                                                                  <  4:100043/149‑1 (MQ=255)
               gCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGc                                                                                                                                  >  7:170256/1‑149 (MQ=255)
               gCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGc                                                                                                                                  >  4:262160/1‑149 (MQ=255)
                 tCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCa                                                                                                                                >  4:183587/1‑149 (MQ=255)
                 tCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCAGGCACCGGGGCAGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTAGCCGTGGCCa                                                                                                                                >  4:390839/1‑149 (MQ=255)
                   aaCGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGTGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCAt                                                                                                                               <  1:114543/149‑1 (MQ=255)
                   aaCGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGGGCGTGGTCGCCGTGGCCAt                                                                                                                               <  5:84525/148‑1 (MQ=255)
                   aaCGTCACGCCGTGGTGCAGCAGGCGATCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGCTGCGTGCGTCGTCGCAGTGGCCATg                                                                                                                              >  2:362430/1‑149 (MQ=255)
                   aaCGTCACGCCGTGGTGCAGCAGGAGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCGGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGTCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCAt                                                                                                                               <  2:299090/148‑1 (MQ=255)
                    aCGTCACTCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATgg                                                                                                                             <  8:140141/149‑1 (MQ=255)
                    aCGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATgg                                                                                                                             >  4:213708/1‑149 (MQ=255)
                     cGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGGCTGCAGATTGATGGCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATggg                                                                                                                            <  7:192224/149‑1 (MQ=255)
                       tCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGGCGGTGCGTGCGTGGTCGCCGTGGCCATGGGt                                                                                                                           >  3:79350/1‑148 (MQ=255)
                         aCGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTaa                                                                                                                         <  8:235498/148‑1 (MQ=255)
                         aCGCCGTGGTGCAGCAGGCGCTCACCGGGGGGCAGTGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAAt                                                                                                                        <  1:349782/149‑1 (MQ=255)
                          cGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATg                                                                                                                       <  4:79350/149‑1 (MQ=255)
                            ccGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGa                                                                                                                      >  2:2591/1‑148 (MQ=255)
                                 gtgCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGccc                                                                                                                >  3:295061/1‑149 (MQ=255)
                                     agcagGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTc                                                                                                            <  4:167068/149‑1 (MQ=255)
                                     agcagGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTc                                                                                                            <  3:262160/149‑1 (MQ=255)
                                        agGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCAc                                                                                                         <  8:397950/149‑1 (MQ=255)
                                          gcgcTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACgg                                                                                                       <  4:295061/149‑1 (MQ=255)
                                            gcTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGgc                                                                                                     <  5:252930/149‑1 (MQ=255)
                                                aCCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATgg                                                                                                                             <  6:389960/121‑1 (MQ=255)
                                                aCCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATgg                                                                                                                             >  5:389960/1‑121 (MQ=255)
                                                aCCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGgccgc                                                                                                  >  7:248996/1‑148 (MQ=255)
                                                   gTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAgg                                                                                              <  5:96595/149‑1 (MQ=255)
                                                    tAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAggg                                                                                             <  8:368949/149‑1 (MQ=255)
                                                        gCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCg                                                                                         <  2:429187/149‑1 (MQ=255)
                                                        gCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAAAGCCCGCACCGGGGCTGGCGGTCAGAGAATGGCCAATGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCACGCGCCACGGGCCGCCAGGGGTc                                                                                          >  8:388605/1‑148 (MQ=255)
                                                          aGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGAt                                                                                       <  8:72826/149‑1 (MQ=255)
                                                            ggTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATg                                                                                      >  8:44507/1‑148 (MQ=255)
                                                             gTCTGCAGATTGATGTCCTGGCCAAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCACGCTCCACGGGCCGCCAGGGGTCGATGTa                                                                                    >  7:359742/1‑149 (MQ=255)
                                                              tCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAg                                                                                   <  8:409916/149‑1 (MQ=255)
                                                              gcTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAg                                                                                   <  7:379128/148‑1 (MQ=255)
                                                                     aTTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAAtctc                                                                            >  5:219134/1‑149 (MQ=255)
                                                                     aTTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAAtctc                                                                            <  3:175667/149‑1 (MQ=255)
                                                                        gATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCcgg                                                                         >  8:253370/1‑149 (MQ=255)
                                                                        gATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCcg                                                                          <  1:362430/148‑1 (MQ=255)
                                                                          tGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCcgggc                                                                       >  7:239035/1‑149 (MQ=255)
                                                                            tCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCcgggcgg                                                                     >  2:284610/1‑149 (MQ=255)
                                                                            tCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCcgggcgg                                                                     >  8:318566/1‑149 (MQ=255)
                                                                            tCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCcgggcgg                                                                     <  8:170256/149‑1 (MQ=255)
                                                                                   ccAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCTGGCGGGCAGTa                                                               >  1:121110/1‑148 (MQ=255)
                                                                                    cAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGgc                                                                                                     >  6:355504/1‑109 (MQ=255)
                                                                                    cAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGgc                                                                                                     <  5:355504/109‑1 (MQ=255)
                                                                                            tGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCg                                                     >  7:55010/1‑149 (MQ=255)
                                                                                               gcAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCgggg                                                  >  2:384015/1‑149 (MQ=255)
                                                                                                cAGAACGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGgggc                                                 >  4:355476/1‑149 (MQ=255)
                                                                                                 aGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGgggcg                                                <  8:384445/149‑1 (MQ=255)
                                                                                                   aaTGCCGGCACCGGGGCTGGCGGTCCGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGgggcggg                                              <  8:239035/149‑1 (MQ=255)
                                                                                                   aaTGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGgggcgg                                               <  2:83372/148‑1 (MQ=255)
                                                                                                    aTGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACTGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGgggcggg                                              <  8:359742/148‑1 (MQ=255)
                                                                                                       ccGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGAt                                          <  1:384015/149‑1 (MQ=255)
                                                                                                        cGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATg                                         <  1:2591/149‑1 (MQ=255)
                                                                                                         ggCACCGGGGCTGGCGGTCAGATACTGGCCAGTGCCGGTGCGTGCGTGGGCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGGCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGa                                        <  7:388605/149‑1 (MQ=255)
                                                                                                         acgcaccggcaatggccattatctgaccgccagccccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGAt                                          >  3:158760‑M2/43‑148 (MQ=255)
                                                                                                         acgcaccggcaatggccattatctgaccgccagccccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGAt                                          <  4:158760‑M2/106‑1 (MQ=255)
                                                                                                           gcaccggcaatggccattatctgaccgccagccccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGAc                                       >  6:279753‑M2/41‑149 (MQ=255)
                                                                                                                 ggCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTc                                 >  7:217669/1‑148 (MQ=255)
                                                                                                                    cTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGTAGGCGATGACGAGGTCCAt                              <  5:171424/149‑1 (MQ=255)
                                                                                                                    cTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCAt                              <  8:248996/149‑1 (MQ=255)
                                                                                                                       gCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATgg                            >  4:141368/1‑148 (MQ=255)
                                                                                                                          gTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACg                        >  1:57379/1‑149 (MQ=255)
                                                                                                                          attatctgaccgccagccccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACg                        <  5:279753‑M2/124‑1 (MQ=255)
                                                                                                                           tCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACgg                       <  7:44507/149‑1 (MQ=255)
                                                                                                                           tCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACgg                       <  1:284610/149‑1 (MQ=255)
                                                                                                                             aGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACggg                      >  1:148711/1‑148 (MQ=255)
                                                                                                                              gATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCa                    <  8:55010/149‑1 (MQ=255)
                                                                                                                               aTAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCAc                   >  5:49368/1‑149 (MQ=255)
                                                                                                                               aTAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCAc                   <  6:113586/149‑1 (MQ=255)
                                                                                                                                tAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACt                  <  6:219134/149‑1 (MQ=255)
                                                                                                                                            ccggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGt       >  4:343135‑M2/8‑148 (MQ=255)
                                                                                                                                             cggtgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTa     >  4:75782‑M2/7‑149 (MQ=255)
                                                                                                                                                tgcGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTAccc  <  2:148711‑M2/146‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CCCGGCCGGGTGCAGGCTCAACGTCACGCCGTGGTGCAGCAGGCGCTCACCGTAGGGCAGGGTCTGCAGATTGATGTCCTGGCCCAGGCGGCTGCGCAGAATGCCGGCACCGGGGCTGGCGGTCAGATAATGGCCATTGCCGGTGCGTGCGTGGTCGCCGTGGCCATGGGTAATGACAGCCCGCTCCACGGGCCGCCAGGGGTCGATGTAGAAATCTCCGGGCGGGCAGTACAGGCCTTCGGGGCGGGCGATGACGAGGTCCATGGCACGGGCACTGGTTCTGGGGTTACCC  >  NC_002947/1265156‑1265447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.