New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4121661	53 (0.740)	4 (0.060)	4/250	NT	7.8%	coding (126/789 nt)	PP_3624	hypothetical protein
	?	NC_002947	= 4121682	45 (0.670)					coding (105/789 nt)	PP_3624	hypothetical protein

AGTCGATCCGCCCGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4121507‑4121661 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacaggCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCCGGGCCGTGGTCACGAG  <  NC_002947/4121682‑4121540                                                                                                                                                                                                                                                                                                            AGTCGATCCGCCCGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGC                                                                                                                                                       <  1:61040/149‑1    CGATCCGCCCGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCA                                                                                                                                                     >  5:74621/1‑148     GATCCGCCCGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCA                                                                                                                                                     >  5:58120/1‑147                                             GGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGC                                                                                                                    <  1:283455/140‑1                                             GGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGC                                                                                                                    >  2:283455/1‑140                                                                                                              ATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGG                                                                                                                     <  7:199790/74‑1                                                                                                              ATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGG                                                                                                                     >  8:199790/1‑74                                                                                                                                                   CGCCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCCGGGCCGTGGTCAC     >  6:149674/1‑149                                                                                                                                                     CCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGG                                                       >  5:291172/1‑97                                                                                                                                                     CCACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGG                                                       <  6:291172/97‑1                                                                                                                                                      CACAGGCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCCGGGCCGTGGTCACGAG  >  5:355967/1‑149                                                                                                                                                                                                                                                                                                            AGTCGATCCGCCCGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4121507‑4121661 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacaggCAACCCGGAATACCCCCCGTACCTGTGGCGCGACCCGCTGAACCCTCAGCGACTGATCGGTGCCAATGCCGACCTGCTCAAATACCTGGGCAAGCAGTTGGGGCTGGAGATAGAGGTGGTTTACGCCGGGCCGTGGTCACGAG  <  NC_002947/4121682‑4121540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.