New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4121661	53 (0.740)	4 (0.060)	4/250	NT	7.8%	coding (126/789 nt)	PP_3624	hypothetical protein
	?	NC_002947	= 4121682	45 (0.670)					coding (105/789 nt)	PP_3624	hypothetical protein

CGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCGGCACA  >  NC_002947/4121519‑4121803                                                                                                                                               |                                                                                                                                                 cGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACggg                                                                                                                                            <  3:402798/149‑1 (MQ=255) cGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACggg                                                                                                                                            <  7:330561/149‑1 (MQ=255) cGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACggg                                                                                                                                            <  3:180165/149‑1 (MQ=255)     gcgcACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGAAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACgggggg                                                                                                                                         >  8:67615/1‑148 (MQ=255)              ttcCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGt                                                                                                                               >  7:209064/1‑149 (MQ=255)                ccTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGtt                                                                                                                              <  7:164738/148‑1 (MQ=255)                     gCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACggg                                                                                                                                            >  1:404310/1‑129 (MQ=255)                     gCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACggg                                                                                                                                            <  2:404310/129‑1 (MQ=255)                      cTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGcctgtg                                                                                                                       >  5:355967‑M2/1‑143 (MQ=255)                         gTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGcctgtggcg                                                                                                                    >  6:149674‑M2/1‑140 (MQ=255)                          tGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑Cgg                                                                                                                  >  4:187291/1‑149 (MQ=255)                          tGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑Cgg                                                                                                                  >  4:180545/1‑149 (MQ=255)                              cACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAg                                                                                                              >  8:54423/1‑149 (MQ=255)                                cGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGcc                                                                                                            >  1:179294/1‑149 (MQ=255)                                 ggCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGcaacccggaataccccccgtacctgtggc                                                                                                                     >  2:283455‑M1/1‑111 (MQ=255)                                 ggCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGcaacccggaataccccccgtacctgtggc                                                                                                                     <  1:283455‑M1/140‑30 (MQ=255)                                    ccGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTa                                                                                                                                       <  4:416741/119‑1 (MQ=255)                                             accaccTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGgcatgcat                                                                                                >  1:115735/1‑148 (MQ=255)                                                accTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCatcatc                                                                                            <  6:74621/149‑1 (MQ=255)                                                     tATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGc                                                                                         <  7:12166/147‑1 (MQ=255)                                                       tctcCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTg                                                                                       <  2:115735/147‑1 (MQ=255)                                                          ccAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGgcatgc                                                                                                  <  1:92734/133‑1 (MQ=255)                                                          ccAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGgcatgc                                                                                                  >  2:92734/1‑133 (MQ=255)                                                          ccAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTg                                                                                    >  2:77930/1‑147 (MQ=255)                                                           cAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGc                                                                                   <  1:317179/147‑1 (MQ=255)                                                                       cTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGgca‑g                                                                      <  8:74542/147‑1 (MQ=255)                                                                        ttGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGca‑gcag                                                                   >  2:180494/1‑149 (MQ=255)                                                                           cccAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGcctgtgg                                                                                                                      >  5:291172‑M2/1‑90 (MQ=255)                                                                           cccAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGcctgtgg                                                                                                                      <  6:291172‑M2/97‑8 (MQ=255)                                                                            ccAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCTCAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGa                                                                >  4:340700/1‑148 (MQ=255)                                                                            ccAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGa                                                                >  6:122095/1‑148 (MQ=255)                                                                             cAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACa                                                              <  7:20349/149‑1 (MQ=255)                                                                               ggTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAgg                                                            <  7:169784/149‑1 (MQ=255)                                                                                gTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGGTCGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAgg                                                            <  1:120147/149‑1 (MQ=255)                                                                                gTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTGCAGCGGGTCGCGCCTCAGGTTCGTGTGGTATTCCGGGTTGCGTGTGG‑CTGTCAGCCGTAGGCATGCATCATCCGGTGTTGGAGCGAGGGGCA‑GCAGTGACAGGc                                                           <  8:2224/149‑1 (MQ=255)                                                                                   tttGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGcac                                                         <  6:58120/148‑1 (MQ=255)                                                                                     tGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAggg                                                                           >  2:159653/1‑129 (MQ=255)                                                                                     tGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACAt                                                       >  1:367293/1‑148 (MQ=255)                                                                                        gCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAgg                                                   <  1:175154/149‑1 (MQ=255)                                                                                                gCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGAc                                           <  2:179294/149‑1 (MQ=255)                                                                                                  aTTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGcaacccggaataccccccgtacctgtgg                                                                                                                      <  7:199790‑M1/74‑29 (MQ=255)                                                                                                  aTTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGcaacccggaataccccccgtacctgtgg                                                                                                                      >  8:199790‑M1/1‑46 (MQ=255)                                                                                                   ttGGAACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTg                                        <  7:67615/149‑1 (MQ=255)                                                                                                           gATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCATCCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAg                                 <  1:77930/149‑1 (MQ=255)                                                                                                             tCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCaa                              <  6:432668/149‑1 (MQ=255)                                                                                                               aGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAAc                             <  1:180494/148‑1 (MQ=255)                                                                                                                gTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGc                           >  1:171/1‑149 (MQ=255)                                                                                                                   gCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTc                         >  1:167460/1‑148 (MQ=255)                                                                                                                   gCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAAGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTc                         >  6:352980/1‑148 (MQ=255)                                                                                                                       aGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGatca                    >  2:327277/1‑149 (MQ=255)                                                                                                                       aGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGat                      <  2:367293/147‑1 (MQ=255)                                                                                                                        gggTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGatcat                   <  7:54423/149‑1 (MQ=255)                                                                                                                         ggTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGatcatc                  >  6:207237/1‑149 (MQ=255)                                                                                                                             cAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTAc               <  2:167460/148‑1 (MQ=255)                                                                                                                                  ggTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCt         >  4:124871/1‑149 (MQ=255)                                                                                                                                    tCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCg       >  3:277772/1‑149 (MQ=255)                                                                                                                                    tCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCg       >  8:54928/1‑149 (MQ=255)                                                                                                                                      gcgcCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACTTCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCgg      <  1:327277/148‑1 (MQ=255)                                                                                                                                       cgcCACAGGcaacccggaataccccccgtacctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaatgccgacctgctcaaatacctgggcaagcagttggggctggagatagaggtggtttacgccgggccgtggtcac      >  6:149674‑M1/1‑9 (MQ=255)                                                                                                                                       cgcCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCGGca    <  2:171/149‑1 (MQ=255)                                                                                                                                        gcCACAGGTACGGGGGGTATTCCGGGTTGcctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaatgccgacctgctcaaatacctgggcaagcagttggggctggagatagaggtggtttacgccgggcc              >  2:283455‑M2/1‑29 (MQ=255)                                                                                                                                        gcCACAGGTACGGGGGGTATTCCGGGTTGcctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaatgccgacctgctcaaatacctgggcaagcagttggggctggagatagaggtggtttacgccgggcc              <  1:283455‑M2/140‑112 (MQ=255)                                                                                                                                         ccACAGGcaacccggaataccccccgtacctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaatgccgacctgctcaaatacctggg                                                        <  6:291172‑M1/97‑91 (MQ=255)                                                                                                                                         ccACAGGcaacccggaataccccccgtacctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaatgccgacctgctcaaatacctggg                                                        >  5:291172‑M1/1‑7 (MQ=255)                                                                                                                                         ccACAGGTACGGGGGGTATTCCGGGTTGcctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaat                                                                               <  7:199790‑M2/74‑47 (MQ=255)                                                                                                                                         ccACAGGTACGGGGGGTATTCCGGGTTGcctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaat                                                                               >  8:199790‑M2/1‑28 (MQ=255)                                                                                                                                         ccACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCGGcaca  >  7:218262/1‑149 (MQ=255)                                                                                                                                         ccACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCGGcaca  >  5:342295/1‑149 (MQ=255)                                                                                                                                          cacaGGcaacccggaataccccccgtacctgtggcgcgacccgctgaaccctcagcgactgatcggtgccaatgccgacctgctcaaatacctgggcaagcagttggggctggagatagaggtggtttacgccgggccgtggtcacgag   >  5:355967‑M1/1‑6 (MQ=255)                                                                                                                                               |                                                                                                                                                 CGGTGCGCACTTCTTCCTGGGCTCGTGACCACGGCCCGGCGTAAACCACCTCTATCTCCAGCCCCAACTGCTTGCCCAGGTATTTGAGCAGGTCGGCATTGGCACCGATCAGTCGCTGAGGGTTCAGCGGGTCGCGCCACAGGTACGGGGGGTATTCCGGGTTGCCTGTGG‑CGGTCAGCCGTAGGCATGCATCATCCGCTGTTGCAGCCAGGGGCA‑GCAGTGACAGGCACATCAGGAGCAAGACGTGGCGAAAGCAACGCTCGATCATCTACGACCCTCGGCACA  >  NC_002947/4121519‑4121803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.