| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4738166 = | 73 (1.020) | 5 (0.070) | 5/256 | NT | 6.7% | coding (204/1773 nt) | sdhA | succinate dehydrogenase flavoprotein subunit |
| ? | NC_002947 | 4738204 = | 70 (1.020) | coding (166/1773 nt) | sdhA | succinate dehydrogenase flavoprotein subunit | |||||
GCGCCGGCATGCGCGCAGCGCTGCAACTGGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGTCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4738317‑4738166‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGAAGGAAA > NC_002947/4738204‑4738350 GCGCCGGCATGCGCGCAGCGCTGCAACTGGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGTCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGG < 8:316728/149‑1 CGCCGGCATGCGCGCAGCGCTGCAACTGGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGTCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGC > 2:306491/1‑149 CGCCGGCATGCGCGCAGCGCTGCAACTGGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGTCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGC > 6:151700/1‑149 CCGGCATGCGCGCAGCGCTGCAACTTGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGGCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGC < 8:151775/149‑1 CCGGCATGCGCGCAGCGCTGCAACTGGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGTCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGC < 3:204305/149‑1 CTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCC > 7:205849/1‑149 TGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATG < 5:117977/146‑1 TGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATG > 6:117977/1‑146 GCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGC > 3:269820/1‑140 GCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGC < 4:269820/140‑1 GCGCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGAAGG > 7:274918/1‑148 GCAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGAAGGAAA < 8:205849/149‑1 GCGCCGGCATGCGCGCAGCGCTGCAACTGGCTCAAGGCGGCCACAAGACTGCCGTAGTCACCAAGGTCTTCCCGACCCGTTCGCACACCGTATCCGCCCAGGGCGGCATCACCTGCGCCATCGCTTCGGCCGACCCGAACGACGACTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4738317‑4738166‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcAGGTGATGCCGCCCTGGGCGGATACGGTGTGCGAACGGGTCGGGAAGACCTTGGTGACTACGGCAGTCTTGTGGCCGCCTTGAGCCAGTTGCAGCGCTGCGCGCATGCCGGCGCCGCCGCCACCGATGATGATGGCGTCGAAGGAAA > NC_002947/4738204‑4738350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |