New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5137375 | 74 (1.030) | 5 (0.070) | 5/256 | NT | 6.6% | coding (227/894 nt) | PP_4522 | LysR family transcriptional regulator |
? | NC_002947 | = 5137408 | 70 (1.020) | coding (194/894 nt) | PP_4522 | LysR family transcriptional regulator |
GGGTGCTCCTGGCTGTAGGCACCGATGGCTTCGGCCAACGGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5137225‑5137375 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCCGTT < NC_002947/5137408‑5137261 GGGTGCTCCTGGCTGTAGGCACCGATGGCTTCGGCCAACGGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAG < 3:9140/149‑1 GTGCTCCTGGCTGTAGGCACCGATGGCTTCGGCCAACGGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAG > 4:346753/1‑147 GCACCGATGGCTTCGGCCAACGGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCAAGGGCGAGCTGTTCCA > 1:129277/1‑149 ACCGATGGCTTCGGCCAACGGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCAAGGGCGAGCTGTTCCATC < 5:277945/149‑1 GGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCT < 2:129277/149‑1 CGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGC < 1:338871/136‑1 CGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGC > 2:338871/1‑136 CCAGCAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTG < 3:172333/149‑1 AGCAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCC > 8:406701/1‑149 GCAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCCG > 2:108689/1‑149 CAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCCGT > 2:6557/1‑149 CAAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCCGT > 2:97626/1‑149 AAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCCGTT > 2:182776/1‑149 GGGTGCTCCTGGCTGTAGGCACCGATGGCTTCGGCCAACGGCAAGGCGCGATCACCGACGGTGGAGTCGATCACCCCAAGGTTGAGGGTGCCACGCAGTTCGCCCTTCAGGGCGGCGGCATACTGCTCGAAACCGTCCAGCTCGGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5137225‑5137375 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaAGGGCGAGCTGTTCCATCAGGAAACCCTGCGCCTGCTGGCCGAGCTGGACGGTTTCGAGCAGTATGCCGCCGCCCTGAAGGGCGAACTGCGTGGCACCCTCAACCTTGGGGTGATCGACTCCACCGTCGGTGATCGCGCCTTGCCGTT < NC_002947/5137408‑5137261 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |