| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5380510 | 76 (1.060) | 5 (0.070) | 5/258 | NT | 5.6% | coding (92/405 nt) | fur | ferric iron uptake global transcriptional repressor Fur |
| ? | NC_002947 | = 5380557 | 97 (1.410) | coding (45/405 nt) | fur | ferric iron uptake global transcriptional repressor Fur | |||||
CCAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5380358‑5380510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCCTGC‑C‑‑TCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGA < NC_002947/5380557‑5380502 CCAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATG > 5:422371/1‑149 CAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGT < 3:124242/149‑1 GCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAAGCACCAGACCCGCCGCCTCGAACTGTGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATTTGA < 5:303521/149‑1 CTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC < 2:205544/149‑1 CGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGT > 5:104952/1‑129 CGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGT < 6:104952/129‑1 CCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGTTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACGCTGCTCGGTAGAGTCAAGATCCTTCAGATGCTCGACTCTA < 1:352578/149‑1 AGACCCGCCGCCTAGAACTGGGTCAGCACGCTATAGACGGTGGCAAGGCCTACATCCTCGCCAGCCTCCATCAGCGCATTGTAGACATCCTCTGCACTCATGTGACGCTGCTCGGTAGAGTCAAGATCCTTCAGATGCTCGACTCTACC < 6:343948/149‑1 GAACTGGGGCAGCACGCGATAGACGGTGGCCATGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGC‑C‑‑TCGAGTCACGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGA < 5:82064/148‑1 CTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGC‑C‑‑TCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCG < 3:235117/105‑1 CTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGC‑C‑‑TCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCG > 4:235117/1‑105 CCAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5380358‑5380510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCCTGC‑C‑‑TCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGA < NC_002947/5380557‑5380502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |