| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5501416 = | 52 (0.730) | 8 (0.130) | 6/236 | NT | 13.9% | intergenic (+27/‑192) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| ? | NC_002947 | 5501494 = | 53 (0.840) | intergenic (+105/‑114) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein | |||||
TATTGTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501578‑5501416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGAT > NC_002947/5501494‑5501636 TATTGTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GG > 3:122504/1‑149TATTGTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GG > 3:128597/1‑149TATTGTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GG > 4:315509/1‑149 TTGTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTGTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCAAAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCC > 3:74040/1‑149 GTACGCCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGCTCTGGTAATGGGCGCTGCTGTGCAGCCAATCGCGACACAAGGCCGCTCCCACAGAATTCCCGCAGCCTCGAATACAGCGCTGTCCTGTGG‑‑‑‑GGCCTT > 4:208472/1‑149 TACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTG > 8:952/1‑149 TACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTT < 4:227405/148‑1 TACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTT < 6:70439/148‑1 TACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTT < 4:210448/148‑1 TACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTT > 3:227405/1‑148 CGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGT < 7:38053/148‑1 GGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGC < 5:192730/149‑1 ATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTA > 8:156048/1‑142 ATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTA < 7:156048/142‑1 CGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAC > 5:51465/1‑139 CGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAC < 6:51465/139‑1 GACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGATGGGCTGCACAGCCGCCCCCATTACCAGACCACCTGCGTCACGTCACCGCACCCCGGCATTTTTACCTATACTCCGC > 1:104711/1‑149 GACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGC > 1:110535/1‑149 CTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAA > 5:360443/1‑148 CTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACACCGGCATTTTTACCTATACTCCGCCGTACAA > 5:117643/1‑148 TGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCT < 6:44761/148‑1 CGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCCTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGAT < 2:325939/149‑1 TATTGTACGGCGGAGTATAGGTAAAAATGCCGGGGTGCGGTGAAGTGACGCAGGTGGTCTGGTAATGGGGGCTGCTGTGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGG‑‑‑‑GGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501578‑5501416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGAT > NC_002947/5501494‑5501636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |