New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5501416 =	52 (0.730)	8 (0.130)	6/236	NT	13.9%	intergenic (+27/‑192)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
	?	NC_002947	5501494 =	53 (0.840)					intergenic (+105/‑114)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein

GCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACC  >  NC_002947/5501271‑5501559                                                                                                                                                   |                                                                                                                                                    gCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATcg                                                                                                                                                  >  4:302499/1‑149 (MQ=255)    atccaggcaatgtgccgacgtgggggcatggagagatccggtcaggaatcgtggtggctattgtagggcggagtataggtaaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATcgcg                                                                                                                                                <  2:325939‑M1/6‑1 (MQ=255)        aggcaatgtgccgacgtgggggcatggagagatccggtcaggaatcgtggtggctattgtacggcggagtataggtaaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGaca                                                                                                                                             <  6:44761‑M1/9‑1 (MQ=255)             ggggCGCGTTGGAGCACCGCGCGGGGACCAGCAATGCCCTGGGACCCAGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAgg                                                                                                                                        <  1:363873/147‑1 (MQ=255)                    gATGGAGAACCTCGCGGGGACCAGCAATG‑CCAAGGTGGTGGTGTTGCCCGCTCACCTGCAAGAGACCGTGCGCGGGTAGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGGGCTTTGCGCCCCAATCGCCACACAAGCGC‑‑‑‑CCACAgg                                                                                                                           >  4:122504/1‑149 (MQ=255)                          gaACCTCGCGGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAgcg                                                                                                                     <  3:83203/149‑1 (MQ=255)                            aCCTCGCGGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCa                                                                                                                   <  7:78469/149‑1 (MQ=255)                              cTCGCGGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGac                                                                                                                                              <  3:24405/124‑1 (MQ=255)                                  cgGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTc                                                                                                             <  1:184554/149‑1 (MQ=255)                                    gggAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGa                                                                                                           <  3:28406/149‑1 (MQ=255)                                    gggAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGa                                                                                                           <  5:354329/149‑1 (MQ=255)                                         cagcaATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCGATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTAGAGGcag                                                                                                      >  2:291586/1‑147 (MQ=255)                                                   cAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCTGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGACACAAGTCC‑‑‑‑GCACAGGCCAGCGGAGTTTTGGAGGGTGCCGCAATTc                                                                                             >  5:131313/1‑149 (MQ=255)                                                   cAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTc                                                                                             >  1:25316/1‑149 (MQ=255)                                                        tggtggtgTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAATATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTgg                                                                                        <  7:345981/149‑1 (MQ=255)                                                                ttgtacggcggagtataggtaaaaatgccggtgtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCCGCTCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAg                                                                                     >  5:117643‑M1/84‑148 (MQ=255)                                                                ttgtacggcggagtataggtaaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCCGCTCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAg                                                                                     >  5:360443‑M1/84‑148 (MQ=255)                                                                ttGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑Ccaca                                                                                                                             <  7:206581/104‑1 (MQ=255)                                                                ttGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTgg                                                                                        <  3:267401/141‑1 (MQ=255)                                                                ttGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGc                                                                                 <  1:214287/148‑1 (MQ=255)                                                                  gCCGGTTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGGGCGTTTGGGCCCAATCCCCACACAACGCC‑‑‑‑CCCAACCGCAACACAGGATTGGCAGCTGCCGCCATTGAGTGGGAgccgccat                                                                              >  4:85134/1‑147 (MQ=255)                                                                  gCCGGCTGACCTGCAAGAGACCGTGCGCTGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCt                                                                               <  2:413779/148‑1 (MQ=255)                                                                   ccGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGGGCCCCTATAGCGACAAAATGCC‑‑‑‑CCACAGGACACCGCAGTATTAGAGGCAGCCGCAAATCAGAGGGCGCGGCCGtg                                                                             >  8:306354/1‑149 (MQ=255)                                                                    cGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTtgt                                                                            <  1:291586/149‑1 (MQ=255)                                                                       gcggagtataggtaaaaatgccggggtgcggtgacgtgacgcaggtggtctggtaatgggggcggctgtgcagcccATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTc                                                                         >  1:104711‑M1/77‑149 (MQ=255)                                                                       gcggagtataggtaaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTc                                                                         >  1:110535‑M1/77‑149 (MQ=255)                                                                            cTGCATGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAATAGCCACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGGCGCAAATGTGTGGGAGCGGCCGTGTGTcgcgct                                                                    >  6:412972/1‑147 (MQ=255)                                                                            cTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGAt                                                                    >  7:952/1‑149 (MQ=255)                                                                             tGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATAGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTAGAGGCTGCCGCAATTATGTGGGGGCGGCCGTTTGTGGGGATg                                                                   >  4:319820/1‑149 (MQ=255)                                                                              gCAAGAGACCGTGCGCGGGTTGGTGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATgg                                                                  <  7:222878/149‑1 (MQ=255)                                                                               cAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATggg                                                                 <  2:236407/149‑1 (MQ=255)                                                                               cAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATgg                                                                  <  8:231595/148‑1 (MQ=255)                                                                                  gtaaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTcg                                                                        <  6:51465‑M1/74‑1 (MQ=255)                                                                                  gtaaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTcg                                                                        >  5:51465‑M1/66‑139 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCAATAGCGAAACAAAGCC‑‑‑‑CCCCCCGACAGCCCAGTATTGGAGGCGGcc                                                                                                    >  4:380271/1‑111 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGcc                                                                                                    <  3:380271/111‑1 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                <  2:72840/147‑1 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                >  1:66641/1‑147 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                <  2:66641/147‑1 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                >  1:72840/1‑147 (MQ=255)                                                                                  gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGGCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTg                                                              <  7:299193/149‑1 (MQ=255)                                                                                   taaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGAt                                                                    >  8:156048‑M1/65‑142 (MQ=255)                                                                                   taaaaatgccggggtgcggtgaagtgacgcaggtggtctggtaatgggggctgctgtgcagcccATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGAt                                                                    <  7:156048‑M1/78‑1 (MQ=255)                                                                                            gcgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGcc                                                    <  3:302499/149‑1 (MQ=255)                                                                                              gggTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGcccc                                                  >  3:315509/1‑149 (MQ=255)                                                                                                    aagggCCGCAACAAGATTTGAGAGTGGCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTa                                             <  5:273155/146‑1 (MQ=255)                                                                                                       ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa                                          <  5:323869/148‑1 (MQ=255)                                                                                                       ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa                                          <  2:25316/148‑1 (MQ=255)                                                                                                       ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa                                          <  2:348492/148‑1 (MQ=255)                                                                                                       ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCa                                          <  3:390447/148‑1 (MQ=255)                                                                                                        gCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGa                                        <  5:412972/149‑1 (MQ=255)                                                                                                        gCCGCAACAAGATTTGAGAGTGTCGGGGGCCCTTTTGGCCCCAAAACCGACACAAGGCC‑‑‑‑CCACAAGACACCCCAGTATTTGAGGCTGGCCCAATTATGTTGGAGCGGGCTTGTGTAGCGATGGGCTGCACCACAACCCCCAATAACaa                                         >  4:420675/1‑147 (MQ=255)                                                                                                          cGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGCCACAAGGCC‑‑‑‑CCACAGGCCAGCGCAGGATTAGAGGCTGGCGCAATTATGTGGGGGCGGGCGTGTGTGGCGGTggg                                                                 >  5:298178/1‑122 (MQ=255)                                                                                                          cGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGacc                                      <  3:319820/149‑1 (MQ=255)                                                                                                               caaGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGACACAAAGCC‑‑‑‑CCACAAGACAGCGCAGTATTAGAAGCTGCCGCAATTCTGTGTGAGCGGCCTTGTGTCGCGCTTGGCTGCACAGCAGCCCCCATTACCAGACCACCTg                                 >  8:118313/1‑149 (MQ=255)                                                                                                                aaGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGc                                <  1:197030/149‑1 (MQ=255)                                                                                                                        agagTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGcc‑‑‑‑c                                                                                                                                 <  5:51486/44‑1 (MQ=255)                                                                                                                            cgataggggCGCAAAGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCCCAGTATTCGAGGCTCCCGCAATTCAGTGGGAGCGGCCTTGTGTCGCGATGGTCTGCACAGCAGCCCCCAATACCAGACCACCTGCGTCCCTTCACCg                    >  3:208472/6‑149 (MQ=37)                                                                                                                                  gggCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGt                              <  4:31459/133‑1 (MQ=255)                                                                                                                                  gggCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGt                              >  3:31459/1‑133 (MQ=255)                                                                                                                                      gcTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACACGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGc           >  4:74040/1‑148 (MQ=255)                                                                                                                                             gcCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc   <  3:420675/149‑1 (MQ=255)                                                                                                                                             gcCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc   <  3:414103/149‑1 (MQ=255)                                                                                                                                               cccTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc  >  1:252573/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATG‑CCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑CCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACC  >  NC_002947/5501271‑5501559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.