New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5501416 =	52 (0.730)	8 (0.130)	6/236	NT	13.9%	intergenic (+27/‑192)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
	?	NC_002947	5501494 =	53 (0.840)					intergenic (+105/‑114)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein

TGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGAT  >  NC_002947/5501346‑5501636                                                                                                                                                     |                                                                                                                                                tGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATAGCGACACAAGGCCCCACAGGACAGCGCAGTATTAGAGGCTGCCGCAATTATGTGGGGGCGGCCGTTTGTGGGGATg                                                                                                                                                 >  4:319820/1‑149 (MQ=255)  gCAAGAGACCGTGCGCGGGTTGGTGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATgg                                                                                                                                                <  7:222878/149‑1 (MQ=255)   cAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATggg                                                                                                                                               <  2:236407/149‑1 (MQ=255)   cAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATgg                                                                                                                                                <  8:231595/148‑1 (MQ=255)      gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                                                                                              >  1:66641/1‑147 (MQ=255)      gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                                                                                              >  1:72840/1‑147 (MQ=255)      gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                                                                                              <  2:72840/147‑1 (MQ=255)      gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGc                                                                                                                                              <  2:66641/147‑1 (MQ=255)      gagaCCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGGCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTg                                                                                                                                            <  7:299193/149‑1 (MQ=255)                gcgGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGcc                                                                                                                                 <  3:302499/149‑1 (MQ=255)                  gggTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGcccc                                                                                                                               >  3:315509/1‑149 (MQ=255)                        aagggCCGCAACAAGATTTGAGAGTGGCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTa                                                                                                                          <  5:273155/146‑1 (MQ=255)                           ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCa                                                                                                                       <  3:390447/148‑1 (MQ=255)                           ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCa                                                                                                                       <  2:348492/148‑1 (MQ=255)                           ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCa                                                                                                                       <  2:25316/148‑1 (MQ=255)                           ggCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCa                                                                                                                       <  5:323869/148‑1 (MQ=255)                            gCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGa                                                                                                                     <  5:412972/149‑1 (MQ=255)                            gCCGCAACAAGATTTGAGAGTGTCGGGGGCCCTTTTGGCCCCAAAACCGACACAAGGCCCCACAAGACACCCCAGTATTTGAGGCTGGCCCAATTATGTTGGAGCGGGCTTGTGTAGCGATGGGCTGCAC‑CACAACCCCCAATAACaa                                                                                                                      >  4:420675/1‑147 (MQ=255)                              cGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGCCACAAGGCCCCACAGGCCAGCGCAGGATTAGAGGCTGGCGCAATTATGTGGGGGCGGGCGTGTGTGGCGGTggg                                                                                                                                               >  5:298178/1‑122 (MQ=255)                              cGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGacc                                                                                                                   <  3:319820/149‑1 (MQ=255)                                   caaGATTTGAGAGTGTCGGGGGCGCTTTTCGCCCCTATAGCGACACAAAGCCCCACAAGACAGCGCAGTATTAGAAGCTGCCGCAATTCTGTGTGAGCGGCCTTGTGTCGCGCTTGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTg                                                                                                              >  8:118313/1‑149 (MQ=255)                                    aaGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGc                                                                                                             <  1:197030/149‑1 (MQ=255)                                                cgataggggCGCAAAGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCCCAGTATTCGAGGCTCCCGCAATTCAGTGGGAGCGGCCTTGTGTCGCGATGGTCTGCAC‑AGCAGCCCCCAATACCAGACCACCTGCGTCCCTTCACCg                                                                                                 >  3:208472/6‑149 (MQ=37)                                                      gggCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGt                                                                                                           <  4:31459/133‑1 (MQ=255)                                                      gggCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGt                                                                                                           >  3:31459/1‑133 (MQ=255)                                                          gcTTTGCGCCCCTATCGCGACACAAGGCCCCACACGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGc                                                                                        >  4:74040/1‑148 (MQ=255)                                                                 gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc                                                                                <  3:414103/149‑1 (MQ=255)                                                                 gcCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc                                                                                <  3:420675/149‑1 (MQ=255)                                                                   cccTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAcc                                                                               >  1:252573/1‑148 (MQ=255)                                                                       atcgcgacacaaggccgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTa                                                                                 <  7:156048‑M2/64‑1 (MQ=255)                                                                       atcgcgacacaaggccgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTa                                                                                 >  8:156048‑M2/79‑142 (MQ=255)                                                                          GCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTcc                                                                       <  5:192730‑M1/149‑1 (MQ=255)                                                                           cgacacaaggccgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc                                                                                >  5:51465‑M2/75‑139 (MQ=255)                                                                           cgacacaaggccgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTAc                                                                                <  6:51465‑M2/65‑1 (MQ=255)                                                                            gacacaaggccgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatGGGCTGCAC‑AGCCGCCCCCATTACCAGACCACCTGCGTCACGTCACCGCACCCCGGCATTTTTACCTATACTccgc                                                                     >  1:104711‑M2/74‑149 (MQ=255)                                                                            gacacaaggccgctcccacagaattgcggcagcctcgaatactgcgctgtcctgtggggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTccgc                                                                     >  1:110535‑M2/74‑149 (MQ=255)                                                                               ACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTccgccg                                                                   <  7:38053‑M1/148‑1 (MQ=255)                                                                                CAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTa                                                                 >  8:952‑M1/1‑149 (MQ=255)                                                                                 AAGGCCCCACAGGACAGCGCTGTATTCGAGGCTGCGGGAATTCTGTGGGAGCGGCCTTGTGTCGCGATTGGCTGCAC‑AGCAGCGCCCATTACCAGAGCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGGCGTAc                                                                >  4:208472‑M1/1‑149 (MQ=255)                                                                                 AAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTa                                                                 <  4:210448‑M1/148‑1 (MQ=255)                                                                                 AAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTa                                                                 <  4:227405‑M1/148‑1 (MQ=255)                                                                                 AAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTa                                                                 >  3:227405‑M1/1‑148 (MQ=255)                                                                                 AAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTa                                                                 <  6:70439‑M1/148‑1 (MQ=255)                                                                                   GGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTTTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCACACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACaa                                                              >  3:74040‑M1/1‑149 (MQ=255)                                                                                    ctcccacagaattgcggcagcctcgaatactgcgctgtcctgtgggagcggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACaa                                                              >  5:360443‑M2/66‑148 (MQ=255)                                                                                    ctcccacagaattgcggcagcctcgaatactgcgctgtcctgtgggagcggccttgtgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACACCGGCATTTTTACCTATACTCCGCCGTACaa                                                              >  5:117643‑M2/66‑148 (MQ=255)                                                                                     CCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATa                                                            >  4:315509‑M1/1‑149 (MQ=255)                                                                                     CCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATa                                                            >  3:122504‑M1/1‑149 (MQ=255)                                                                                     CCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATa                                                            >  3:128597‑M1/1‑149 (MQ=255)                                                                                       ccACAGGACAGCTCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGc                                                          <  3:85134/149‑1 (MQ=255)                                                                                       ccACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGccc                                                                                                                                <  5:165224/79‑1 (MQ=255)                                                                                       ccACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGccc                                                                                                                                >  6:165224/1‑79 (MQ=255)                                                                                           aGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGccac                                                       >  6:291622/1‑148 (MQ=255)                                                                                                  cgcAGTATTCGAGGCTTCCGCAATTCTGTGGGAGCGGCCTTGTGTCGAGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTc                                               <  6:131313/149‑1 (MQ=255)                                                                                                  cgcAGTATTCGAGGCTGCCGCAATTCTGAGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTc                                               <  7:306354/149‑1 (MQ=255)                                                                                                     aGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCGTTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCt                                             >  3:36040/1‑148 (MQ=255)                                                                                                     aGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGAtt                                                <  1:260609/145‑1 (MQ=255)                                                                                                     aGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGAtt                                                >  2:260609/1‑145 (MQ=255)                                                                                                     aGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCt                                             >  6:415311/1‑148 (MQ=255)                                                                                                         ttCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCCCCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCg                                        >  6:304432/1‑149 (MQ=255)                                                                                                         ttCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGAcc                                         <  5:291622/148‑1 (MQ=255)                                                                                                         ttCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAG‑CCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCg                                        >  8:387670/1‑148 (MQ=255)                                                                                                           cGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGa                                      >  3:266411/1‑149 (MQ=255)                                                                                                            gAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCACGAGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATAATCCGCCGTACAATAGCCACAACGATTCCTGACCGGa                                      >  1:325939/1‑149 (MQ=255)                                                                                                            gAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCGTTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGa                                      <  4:36040/148‑1 (MQ=255)                                                                                                            gAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt                                     >  4:374059/1‑149 (MQ=255)                                                                                                            gAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt                                     >  4:383621/1‑149 (MQ=255)                                                                                                                 tGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAtctctc                                >  7:275031/1‑149 (MQ=255)                                                                                                                  gCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt                                     >  7:254894/1‑143 (MQ=255)                                                                                                                  gCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt                                     <  8:254894/143‑1 (MQ=255)                                                                                                                    cGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCAt                             >  7:107173/1‑149 (MQ=255)                                                                                                                    cGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCAt                             <  8:107173/149‑1 (MQ=255)                                                                                                                     gCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATg                            >  7:35233/1‑149 (MQ=255)                                                                                                                     gCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTACATg                            <  2:252573/149‑1 (MQ=255)                                                                                                                      cAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGc                           >  4:110169/1‑149 (MQ=255)                                                                                                                       aaTTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt                                     <  4:414637/138‑1 (MQ=255)                                                                                                                       aaTTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGAt                                     >  3:414637/1‑138 (MQ=255)                                                                                                                        aTTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGccc                         >  3:359389/1‑149 (MQ=255)                                                                                                                            tgtgGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCAc                     >  5:44761/1‑149 (MQ=255)                                                                                                                            tgtgGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCAc                     >  7:328408/1‑149 (MQ=255)                                                                                                                             gtgGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCCCCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACg                    >  7:372863/1‑149 (MQ=255)                                                                                                                               gggAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTc                  >  3:102466/1‑149 (MQ=255)                                                                                                                                ggAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCg                 >  7:137053/1‑149 (MQ=255)                                                                                                                                 gAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCgg                <  8:38053/149‑1 (MQ=255)                                                                                                                                 gAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCg                 <  5:415311/148‑1 (MQ=255)                                                                                                                                  aGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCgg                >  6:150084/1‑148 (MQ=255)                                                                                                                                            tgtcgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCt      <  6:44761‑M2/139‑1 (MQ=255)                                                                                                                                               cgcgatGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCCTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGAt  <  2:325939‑M2/143‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                TGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCCCACAGGACAGCGCAGTATTCGAGGCTGCCGCAATTCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAC‑AGCAGCCCCCATTACCAGACCACCTGCGTCACTTCACCGCACCCCGGCATTTTTACCTATACTCCGCCGTACAATAGCCACCACGATTCCTGACCGGATCTCTCCATGCCCCCACGTCGGCACATTGCCTGGAT  >  NC_002947/5501346‑5501636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.