| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5710269 = | 58 (0.810) | 3 (0.040) | 3/260 | NT | 5.2% | coding (4287/4761 nt) | PP_5009 | hypothetical protein |
| ? | NC_002947 | 5710306 = | 54 (0.780) | coding (4324/4761 nt) | PP_5009 | hypothetical protein | |||||
TCAGCCAGGAAGCGAAGGGCCTTGCCGTCGGGATGGCGGGTGTTCAGATACGCGTCGGTGAGCAGCCGAAGCCTCTCTTGATGGATGCGGTCTACCGCAGCCCGAAGGAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5710418‑5710269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGA > NC_002947/5710306‑5710450 TCAGCCAGGAAGCGAAGGGCCTTGCCGTCGGGATGGCGGGTGTTCAGATACGCGTCGGTGAGCAGCCGAAGCCTCTCTTGATGGATGCGGTCTACCGCAGCCCGAAGGAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGT > 5:172621/1‑149 CAGCCAGGAAGCGAAGGGCCTTGCCGTCGGGATGGCGGGTGTTCAGATACGCGTCGGTGAGCAGCCGAAGCCTCTCTTGATGGATGCGGTCTACCGCAGCCCGAAGGAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGT > 3:231764/1‑148 CCGAAGGAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTC > 8:327522/1‑149 GGAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTC < 7:327522/149‑1 GAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCC > 8:219504/1‑149 GGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCTAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGT < 1:371997/147‑1 GTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGA < 1:371349/148‑1 GTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGA < 3:188496/148‑1 TCAGCCAGGAAGCGAAGGGCCTTGCCGTCGGGATGGCGGGTGTTCAGATACGCGTCGGTGAGCAGCCGAAGCCTCTCTTGATGGATGCGGTCTACCGCAGCCCGAAGGAGGTCGACCAAGCTGGAATCCAGTGGGTTGTTCAGCTCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5710418‑5710269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGA > NC_002947/5710306‑5710450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |