New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5710269 =58 (0.810)3 (0.040) 3/260 NT 5.2% coding (4287/4761 nt) PP_5009 hypothetical protein
?NC_002947 5710306 = 54 (0.780)coding (4324/4761 nt) PP_5009 hypothetical protein

CACAGCTTCGCCAGCGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGC  >  NC_002947/5710124‑5710415
                                                                                                                                                 |                                                                                                                                                  
tcacggtctgccttatccgaatccgcttctgctcagccaggaagcgaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGAc                                                                                                                                                  <  1:371349‑M1/3‑1 (MQ=255)
tcacggtctgccttatccgaatccgcttctgctcagccaggaagcgaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGAc                                                                                                                                                  <  3:188496‑M1/3‑1 (MQ=255)
 acaGCTTCGCCAGCGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGAcc                                                                                                                                                 >  7:357055/1‑148 (MQ=255)
 acaGCTTCGCCAGCGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGAcc                                                                                                                                                 >  4:131842/1‑148 (MQ=255)
  acggtctgccttatccgaatccgcttctgctcagccaggaagcgaagggcctagccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGAcc                                                                                                                                                 <  1:371997‑M1/4‑1 (MQ=255)
   aGCTTCGCCAGCGAGCAAACCGCCTGATGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGAcc                                                                                                                                                 >  8:365839/1‑146 (MQ=255)
        gccccccGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGa                                                                                                                                          <  1:151483/142‑1 (MQ=255)
        cGCCAGCGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTg                                                                                                                                           <  4:112080/147‑1 (MQ=255)
          accccttgCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGa                                                                                                                                          <  1:156734/139‑1 (MQ=255)
              cGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAAccc                                                                                                                                   <  5:234978/149‑1 (MQ=255)
               gAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCa                                                                                                                                  <  8:357055/149‑1 (MQ=255)
                    aaCCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGa                                                                                                                             <  5:185550/149‑1 (MQ=255)
                       cGCCTTCTGGCAGAGGTGTATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGTATTc                                                                                                                          <  2:160761/149‑1 (MQ=255)
                            gctgGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCt                                                                                                                     <  2:226556/149‑1 (MQ=255)
                             ctgGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGTGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCtt                                                                                                                    >  8:89278/1‑149 (MQ=255)
                               ggCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTgg                                                                                                                  >  6:410282/1‑149 (MQ=255)
                                 cAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTc                                                                                                                <  7:365839/149‑1 (MQ=255)
                                  agagGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTc                                                                                                                >  8:149049/1‑148 (MQ=255)
                                   gagGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGa                                                                                                              <  3:90010/149‑1 (MQ=255)
                                       ggaagcgaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGAcctc                                                                                                          >  8:219504‑M1/107‑149 (MQ=255)
                                        gaagcgaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGAcctcc                                                                                                         <  7:327522‑M1/44‑1 (MQ=255)
                                           tggaAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTc                                                                                                      >  5:340071/1‑149 (MQ=255)
                                             gaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCgg                                                                                                    >  8:327522‑M1/101‑149 (MQ=255)
                                             gaAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCg                                                                                                     <  3:321647/148‑1 (MQ=255)
                                             gaAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCGGAGCGACTTTCTGGAATGGCCGGCCGGTGCCATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGACCAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCgg                                                                                                    >  5:328104/1‑149 (MQ=255)
                                              aaaaaTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGCCCTCCTTCggg                                                                                                   >  4:188496/1‑149 (MQ=255)
                                              aaaaaTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCggg                                                                                                   >  1:422336/1‑149 (MQ=255)
                                                 aaTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTg                                                                                                <  5:410282/149‑1 (MQ=255)
                                                  aTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCggg                                                                                                   >  1:251572/1‑145 (MQ=255)
                                                  aTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCggg                                                                                                   <  2:251572/145‑1 (MQ=255)
                                                  aTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGc                                                                                               >  4:325879/1‑149 (MQ=255)
                                                   tCGCCTTCGACGCTCACTATGCCGATGAGCCCAACAGCCGGAGCGACTTTCTGGAATGGCCGGCCTGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCg                                                                                              <  1:297245/149‑1 (MQ=255)
                                                     gCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGTGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGt                                                                                            <  7:89278/149‑1 (MQ=255)
                                                      ccTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCgg                                                                                             >  1:166948/1‑147 (MQ=255)
                                                          cgccgcTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGa                                                                                         <  6:340071/147‑1 (MQ=255)
                                                          cgccgcTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGAcc                                                                                       >  5:274631/1‑149 (MQ=255)
                                                              gcTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGCTCGACCTCCTTCGGGCTGCGGAAGACCGcat                                                                                   >  2:141464/1‑149 (MQ=255)
                                                                  aCTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGcatccat                                                                               <  7:149049/149‑1 (MQ=255)
                                                                  aCTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTCACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTACGGGCTGCGGTAGACCGcatccat                                                                               <  2:380227/149‑1 (MQ=255)
                                                                   cTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGcatccatc                                                                              <  5:301117/149‑1 (MQ=255)
                                                                   cTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGcatccatc                                                                              <  2:422336/149‑1 (MQ=255)
                                                                         cGATGAGCCGAACAGCCTGAGCGTCTTTCTGTAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCTACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCtt                                                                                                       <  8:386752/118‑1 (MQ=255)
                                                                         cGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGACCAGAAGCAACTGACCGAGCTGAACAAACCACTGGATTCCAGCTTGGTCGACCTCCtt                                                                                                       >  7:386752/1‑118 (MQ=255)
                                                                            tGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTCGTCGACCTCCTACGGGCTGCGCTAGACCGCATCCATCAagagagc                                                                      >  8:351287/1‑147 (MQ=255)
                                                                                  cAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGgc                                                               >  8:4427/1‑149 (MQ=255)
                                                                                       gCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTc                                                          <  2:166948/149‑1 (MQ=255)
                                                                                             gCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAc                                                    <  3:325879/149‑1 (MQ=255)
                                                                                              cGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAcg                                                   >  7:102231/1‑149 (MQ=255)
                                                                                              cGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAcg                                                   >  3:7076/1‑149 (MQ=255)
                                                                                                aCTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAcgcg                                                 >  4:126147/1‑149 (MQ=255)
                                                                                                  tttCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTa                                               >  6:271668/1‑149 (MQ=255)
                                                                                                   ttCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGAACGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTa                                               >  7:15034/1‑148 (MQ=255)
                                                                                                   ttCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACATCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTAt                                              >  5:533/1‑149 (MQ=255)
                                                                                                       ggAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTg                                           >  3:123076/1‑148 (MQ=255)
                                                                                                        gAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCt                                            <  6:274631/146‑1 (MQ=255)
                                                                                                           tGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCATCAAGAGAGGCtt                                                                   >  2:185938/1‑119 (MQ=255)
                                                                                                           tGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCATCAAGAGAGGCtt                                                                   <  1:185938/119‑1 (MQ=255)
                                                                                                            ggccggccGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACAcc                                     >  5:330745/1‑149 (MQ=255)
                                                                                                             gccggccgGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACAccc                                    <  6:328104/149‑1 (MQ=255)
                                                                                                                   cggTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATc                              >  4:231764/1‑149 (MQ=255)
                                                                                                                         cATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACg                        >  2:242528/1‑149 (MQ=255)
                                                                                                                              gcgAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAg                   >  1:391796/1‑149 (MQ=255)
                                                                                                                                    tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTTGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt             >  1:264662/1‑149 (MQ=255)
                                                                                                                                    tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt             <  8:102231/149‑1 (MQ=255)
                                                                                                                                    tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt             >  5:213142/1‑149 (MQ=255)
                                                                                                                                    tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt             <  7:351287/149‑1 (MQ=255)
                                                                                                                                     ccAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt             <  5:152668/148‑1 (MQ=255)
                                                                                                                                             aaCTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTg    >  2:420342/1‑149 (MQ=255)
                                                                                                                                               cTGACCGAGCTGAGCGACCCACTGGATTCCAGCTTGGTCGCCCTCCTTCGGGCTGCGGTAGACCGCATCCAGGAAGAGCGGCTTCGGCTGCTCAGCGACGCGTATCTGACCACCCGCCATCCCGACGGCACGGCCCTTCGCTTcggggc  >  8:328556/1‑144 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CACAGCTTCGCCAGCGAGCAAACCGCCTGCTGGCAGAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGC  >  NC_002947/5710124‑5710415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.