New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5710269 =58 (0.810)3 (0.040) 3/260 NT 5.2% coding (4287/4761 nt) PP_5009 hypothetical protein
?NC_002947 5710306 = 54 (0.780)coding (4324/4761 nt) PP_5009 hypothetical protein

GAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGA  >  NC_002947/5710159‑5710450
                                                                                                                                                   |                                                                                                                                                
gagGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGa                                                                                                                                                 <  3:90010/149‑1 (MQ=255)
    ggaagcgaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGAcctc                                                                                                                                             >  8:219504‑M1/107‑149 (MQ=255)
     gaagcgaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGAcctcc                                                                                                                                            <  7:327522‑M1/44‑1 (MQ=255)
        tggaAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTc                                                                                                                                         >  5:340071/1‑149 (MQ=255)
          gaagggccttgccgtcgggatggcgggtgttcagatacgcgtcggtgagcagccgaagcctctcttgatggatgcggtctaccgcagcccgaaggaggtcGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCgg                                                                                                                                       >  8:327522‑M1/101‑149 (MQ=255)
          gaAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCg                                                                                                                                        <  3:321647/148‑1 (MQ=255)
          gaAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCGGAGCGACTTTCTGGAATGGCCGGCCGGTGCCATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGACCAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCgg                                                                                                                                       >  5:328104/1‑149 (MQ=255)
           aaaaaTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGCCCTCCTTCggg                                                                                                                                      >  4:188496/1‑149 (MQ=255)
           aaaaaTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCggg                                                                                                                                      >  1:422336/1‑149 (MQ=255)
              aaTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTg                                                                                                                                   <  5:410282/149‑1 (MQ=255)
               aTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCggg                                                                                                                                      >  1:251572/1‑145 (MQ=255)
               aTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCggg                                                                                                                                      <  2:251572/145‑1 (MQ=255)
               aTCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGc                                                                                                                                  >  4:325879/1‑149 (MQ=255)
                tCGCCTTCGACGCTCACTATGCCGATGAGCCCAACAGCCGGAGCGACTTTCTGGAATGGCCGGCCTGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCg                                                                                                                                 <  1:297245/149‑1 (MQ=255)
                  gCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGTGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGt                                                                                                                               <  7:89278/149‑1 (MQ=255)
                   ccTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCgg                                                                                                                                >  1:166948/1‑147 (MQ=255)
                       cgccgcTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGa                                                                                                                            <  6:340071/147‑1 (MQ=255)
                       cgccgcTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGAcc                                                                                                                          >  5:274631/1‑149 (MQ=255)
                           gcTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGCTCGACCTCCTTCGGGCTGCGGAAGACCGcat                                                                                                                      >  2:141464/1‑149 (MQ=255)
                               aCTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGcatccat                                                                                                                  <  7:149049/149‑1 (MQ=255)
                               aCTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTCACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTACGGGCTGCGGTAGACCGcatccat                                                                                                                  <  2:380227/149‑1 (MQ=255)
                                cTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGcatccatc                                                                                                                 <  5:301117/149‑1 (MQ=255)
                                cTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGcatccatc                                                                                                                 <  2:422336/149‑1 (MQ=255)
                                      cGATGAGCCGAACAGCCTGAGCGTCTTTCTGTAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCTACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCtt                                                                                                                                          <  8:386752/118‑1 (MQ=255)
                                      cGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGACCAGAAGCAACTGACCGAGCTGAACAAACCACTGGATTCCAGCTTGGTCGACCTCCtt                                                                                                                                          >  7:386752/1‑118 (MQ=255)
                                         tGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTCGTCGACCTCCTACGGGCTGCGCTAGACCGCATCCATCAagagagc                                                                                                         >  8:351287/1‑147 (MQ=255)
                                               cAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGgc                                                                                                  >  8:4427/1‑149 (MQ=255)
                                                    gCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTc                                                                                             <  2:166948/149‑1 (MQ=255)
                                                          gCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAc                                                                                       <  3:325879/149‑1 (MQ=255)
                                                           cGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAcg                                                                                      >  3:7076/1‑149 (MQ=255)
                                                           cGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAcg                                                                                      >  7:102231/1‑149 (MQ=255)
                                                             aCTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGAcgcg                                                                                    >  4:126147/1‑149 (MQ=255)
                                                               tttCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTa                                                                                  >  6:271668/1‑149 (MQ=255)
                                                                ttCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGAACGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTa                                                                                  >  7:15034/1‑148 (MQ=255)
                                                                ttCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACATCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTAt                                                                                 >  5:533/1‑149 (MQ=255)
                                                                    ggAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTg                                                                              >  3:123076/1‑148 (MQ=255)
                                                                     gAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCt                                                                               <  6:274631/146‑1 (MQ=255)
                                                                        tGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCATCAAGAGAGGCtt                                                                                                      <  1:185938/119‑1 (MQ=255)
                                                                        tGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCATCAAGAGAGGCtt                                                                                                      >  2:185938/1‑119 (MQ=255)
                                                                         ggccggccGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACAcc                                                                        >  5:330745/1‑149 (MQ=255)
                                                                          gccggccgGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACAccc                                                                       <  6:328104/149‑1 (MQ=255)
                                                                                cggTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATc                                                                 >  4:231764/1‑149 (MQ=255)
                                                                                      cATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACg                                                           >  2:242528/1‑149 (MQ=255)
                                                                                           gcgAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAg                                                      >  1:391796/1‑149 (MQ=255)
                                                                                                 tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTTGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt                                                >  1:264662/1‑149 (MQ=255)
                                                                                                 tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt                                                >  5:213142/1‑149 (MQ=255)
                                                                                                 tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt                                                <  8:102231/149‑1 (MQ=255)
                                                                                                 tCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt                                                <  7:351287/149‑1 (MQ=255)
                                                                                                  ccgaaggaggtcgaccaagctggaatccagtgggttgttcagctcggtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTc                                               >  8:327522‑M2/50‑149 (MQ=255)
                                                                                                  ccAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCtt                                                <  5:152668/148‑1 (MQ=255)
                                                                                                       ggaggtcgaccaagctggaatccagtgggttgttcagctcggtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTc                                          <  7:327522‑M2/105‑1 (MQ=255)
                                                                                                        gaggtcgaccaagctggaatccagtgggttgttcagctcggtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTcc                                         >  8:219504‑M2/44‑149 (MQ=255)
                                                                                                          aaCTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTg                                       >  2:420342/1‑149 (MQ=255)
                                                                                                            cTGACCGAGCTGAGCGACCCACTGGATTCCAGCTTGGTCGCCCTCCTTCGGGCTGCGGTAGACCGCATCCAGGAAGAGCGGCTTCGGCTGCTCAGCGACGCGTATCTGACCACCCGCCATCCCGACGGCACGGCCCTTCGCTTcggggc                                     >  8:328556/1‑144 (MQ=255)
                                                                                                               ACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTg                                   >  3:231764‑M1/1‑148 (MQ=255)
                                                                                                               ACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGa                                  >  5:172621‑M1/1‑149 (MQ=255)
                                                                                                                           aacCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGAt                      >  2:371349/1‑149 (MQ=255)
                                                                                                                           aacCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGAt                      >  8:17716/1‑149 (MQ=255)
                                                                                                                                aCTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGCCCCTTCGCTTCATGGc                                     >  6:21856/1‑129 (MQ=255)
                                                                                                                                  tGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGAt                >  1:298545/1‑148 (MQ=255)
                                                                                                                                     aTTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCTAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAgg            >  2:371997/1‑149 (MQ=255)
                                                                                                                                     aTTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAgg            <  2:29919/149‑1 (MQ=255)
                                                                                                                                         cAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGa        >  5:388583/1‑149 (MQ=255)
                                                                                                                                          aGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCATAc       >  7:230148/1‑149 (MQ=255)
                                                                                                                                           gCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGAcc      <  3:131842/149‑1 (MQ=255)
                                                                                                                                               ggtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCTAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGt    <  1:371997‑M2/143‑1 (MQ=255)
                                                                                                                                                gtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGa  <  1:371349‑M2/145‑1 (MQ=255)
                                                                                                                                                gtcGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGa  <  3:188496‑M2/145‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GAGGTGGATGGAAAAATCGCCTTCGCCGCTCACTATGCCGATGAGCCCAACAGCCTGAGCGACTTTCTGGAATGGCCGGCCGGTGACATGCGCGAAGTCCAGCAGCAACTGACCGAGCTGAACAACCCACTGGATTCCAGCTTGGTCGACCTCCTTCGGGCTGCGGTAGACCGCATCCATCAAGAGAGGCTTCGGCTGCTCACCGACGCGTATCTGAACACCCGCCATCCCGACGGCAAGGCCCTTCGCTTCCTGGCTGAGCAGAAGCGGATTCGGATAAGGCAGACCGTGA  >  NC_002947/5710159‑5710450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.