New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 209901	NA (NA)	5 (0.070)	5/254	NT	72.5%	coding (15407/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 209956	2 (0.030)					coding (15462/26049 nt)	PP_0168	putative surface adhesion protein

GCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACC  >  NC_002947/209802‑210049                                                                                                    |                                                                                                                                                     gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG                                                                                                     >  1:409827‑M2/1‑149 (MQ=255) gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG                                                                                                     >  3:427418‑M2/1‑149 (MQ=255) gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG                                                                                                     >  8:386241‑M2/1‑149 (MQ=255) gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG                                                                                                     <  3:93652‑M2/149‑1 (MQ=255) gcgcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAG                                                                                                     >  7:360582‑M2/1‑149 (MQ=255)   gcTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGT                                                                                                   <  2:231704‑M2/149‑1 (MQ=255)    cTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTC                                                                                                  >  4:284054‑M2/1‑149 (MQ=255)     tAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCA                                                                                                 <  1:171606‑M2/149‑1 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCAC                                                                                                <  8:7435‑M2/148‑1 (MQ=255)       aCGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCAC                                                                                                >  5:55383‑M2/1‑148 (MQ=255)                                aaCCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC                                                                                               >  7:145117‑M2/1‑124 (MQ=255)                                aaCCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACC                                                                                               <  8:145117‑M2/124‑1 (MQ=255)                                aaCCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTC                                                                                                  >  7:60933‑M2/1‑121 (MQ=255)                                aaCCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTC                                                                                                  <  8:60933‑M2/121‑1 (MQ=255)                                                                                               cACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCgacgtgctgaccggcgtcttgtccagcgtaagctgttcgaacttgccgac                                             <  4:71546‑M2/111‑51 (MQ=255)                                                                                               cACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCgacgtgctgaccggcgtcttgtccagcgtaagctgttcgaacttgccgac                                             >  3:71546‑M2/1‑61 (MQ=255)                                                                                                 cGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCgacgtgctgaccggcgtcttgtccagcgtaagctgttcgaagttgccgacatacgcgccctcaacggtagcgatcgacatcacgacaggg     <  7:162587‑M2/149‑91 (MQ=255)                                                                                                    cGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCgacgtgctgaccggcgtcttgtccagcgtaagctgttcgaacttgccgacatccgcgccctcaacggttgcgatcgacatcacgacagggtcg  <  1:7770‑M2/149‑94 (MQ=255)                                                                                                    |                                                                                                                                                     GCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAGGGCGCGGATGTCGGCAAGTTCGAACAGCTTACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACCGCCGACCAGACCTCGGTGGCCGAGAACGTCAAGCCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACC  >  NC_002947/209802‑210049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.