New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2098975	59 (0.820)	7 (0.100)	7/252	NT	11.1%	coding (915/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 2099067	57 (0.850)					coding (823/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator

CAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTGGGTCAGGCGGTTTTCC  >  NC_002947/2098828‑2099122                                                                                                                                                    |                                                                                                                                                     cAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGgcgcgcg                                                                                                                                                     >  2:120559/1‑149 (MQ=255)      ccTTGCCCGAGTCATGGGTGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTGGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTgg                                                                                                                                                <  5:444757/149‑1 (MQ=255)      ccTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTgg                                                                                                                                                <  6:124659/149‑1 (MQ=255)      ccTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTgg                                                                                                                                                <  5:291232/149‑1 (MQ=255)      cattGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTgg                                                                                                                                                <  6:419626/147‑1 (MQ=255)       cTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTggg                                                                                                                                               <  5:134517/149‑1 (MQ=255)          gCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGc                                                                                                                                              <  8:393700/147‑1 (MQ=255)               aGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTc                                                                                                                                        >  2:228833/1‑148 (MQ=255)                   aTGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAgcg                                                                                                                                   >  2:248899/1‑149 (MQ=255)                    tGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAgcgc                                                                                                                                  <  1:228833/149‑1 (MQ=255)                    tGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAgcgc                                                                                                                                  >  1:410035/1‑149 (MQ=255)                       gCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCg                                                                                                                               >  2:52478/1‑149 (MQ=255)                       gCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCg                                                                                                                               >  8:185240/1‑149 (MQ=255)                             gCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGc                                                                                                                          <  2:94062/148‑1 (MQ=255)                                aGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGc                                                                                                                      <  3:128963/149‑1 (MQ=255)                                 gTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcct                                                                                                                      >  4:150510‑M1/1‑116 (MQ=255)                                 gTTGCTGGCGTTGCGGGCGGGGCAGCGGGTTGGCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCt                                                                                                                     <  7:378828/149‑1 (MQ=255)                                     cTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTAGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGtt                                                                                                                 <  1:120559/149‑1 (MQ=255)                                      tGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTc                                                                                                                >  3:108250/1‑149 (MQ=255)                                        gCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTc                                                                                                                <  2:107160/147‑1 (MQ=255)                                         cGTTGCTCGCGGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAg                                                                                                             <  6:221033/149‑1 (MQ=255)                                          gTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGc                                                                                                            >  6:26727/1‑149 (MQ=255)                                              cTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGTCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCaaccag                                                                                                         >  7:201020/1‑143 (MQ=255)                                              cTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTAAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCt                                                                                                        >  1:330768/1‑149 (MQ=255)                                                cGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTgg                                                                                                      >  7:266139/1‑149 (MQ=255)                                                 gCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTg                                                                                                       <  4:108250/147‑1 (MQ=255)                                                 gCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGt                                                                                                     >  3:83525/1‑149 (MQ=255)                                                  cTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGt‑t                                                                                                   >  3:155341/1‑149 (MQ=255)                                                     ggCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑Tg                                                                                                  <  7:25169/147‑1 (MQ=255)                                                      ggttctggTTGTCGAGCGCCAGGGCGATCTTGCCGAGCATGCCGTTGAGCGGGGTGGGGATTTCGTGGCTGATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCGATGTCCAGGGCTCGGCTGCGGGCTTGTTCGAGCTCCTGGT‑TGGAc                                                                                               <  4:103220/143‑1 (MQ=255)                                                        aGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGAcag                                                                                             <  1:182659/149‑1 (MQ=255)                                                             gTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGAcaggcgca                                                                                        <  6:139530/149‑1 (MQ=255)                                                             cttGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGCCCAGGAAGGCGGCGCGCGCCTCGGCCATGTCCAGCGCTCGCCTGCGGGCTTCTTCCAGCACCTGCT‑AGGAcaagatcg                                                                                        >  3:103220/2‑143 (MQ=37)                                                                gTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGAcaggctcagg                                                                                      <  2:428029/148‑1 (MQ=255)                                                                  ccAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGgctg                                                                                   >  7:154218/1‑149 (MQ=255)                                                                   cAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGgctgc                                                                                  <  2:410035/149‑1 (MQ=255)                                                                    aGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcag                                                                                  >  4:17402‑M1/1‑81 (MQ=255)                                                                     gcgcCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGt                                                                                                     >  6:252575/1‑129 (MQ=255)                                                                     gcgcCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGt                                                                                                     <  5:252575/129‑1 (MQ=255)                                                                      cgcCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGt                                                                               >  7:319916/1‑149 (MQ=255)                                                                         cAGGGCTATCATTCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGc                                                                            <  4:338192/149‑1 (MQ=255)                                                                         cAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGc                                                                            >  6:114127/1‑149 (MQ=255)                                                                                 tCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCtt                                                                     >  8:358693/1‑148 (MQ=255)                                                                                   aTGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGa                                                                   <  2:355084/148‑1 (MQ=255)                                                                                      ccGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGTCTGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGc                                                                 <  1:64996/148‑1 (MQ=255)                                                                                      ccGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTc                                                               <  4:83525/149‑1 (MQ=255)                                                                                        gAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGt                                                             >  3:197651/1‑149 (MQ=255)                                                                                          gCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGttc                                                           <  3:34058/149‑2 (MQ=255)                                                                                          gCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTg                                                           <  7:92774/149‑1 (MQ=255)                                                                                          gCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTg                                                           <  2:130549/149‑1 (MQ=255)                                                                                             tGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTg                                                        >  8:266139‑M2/1‑148 (MQ=255)                                                                                                cGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggc                                                          >  3:304967‑M1/1‑53 (MQ=255)                                                                                                cGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggc                                                          <  4:304967‑M1/145‑93 (MQ=255)                                                                                                  ttGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTgcgcgc                                                   >  5:26727‑M2/1‑143 (MQ=255)                                                                                                  ttGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTgcgcgc                                                   >  8:319916‑M2/1‑143 (MQ=255)                                                                                                    gAGCGGTGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggcgcgcgcc                                                   <  2:61191‑M1/148‑100 (MQ=255)                                                                                                     aGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggcgcgcgccgc                                                 <  3:17402‑M1/149‑102 (MQ=255)                                                                                                     aGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggcgcgcgccg                                                  <  3:150510‑M1/148‑101 (MQ=255)                                                                                                       cGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGaca                                              <  4:155341/149‑1 (MQ=255)                                                                                                           gggCGGATTTCGTGTCTCATGTTGTCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGAt                                          <  8:325385/147‑1 (MQ=255)                                                                                                                gATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGCGCGCGCCGACACGATGTCtt                                     <  7:358693/149‑1 (MQ=255)                                                                                                                 aTTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTc                                    <  8:154218/149‑1 (MQ=255)                                                                                                                      gTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCt                               >  1:22565/1‑149 (MQ=255)                                                                                                                            cATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGtt                           >  5:376708/1‑147 (MQ=255)                                                                                                                             aTGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGTCTGCGGGCTTGTTCCAGCTCGTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTc                          <  1:248899/147‑1 (MQ=255)                                                                                                                                    ccAGGAAGGCGGCGCGCGCCTTGGCCATGTCCAGCTCTCGGCTGCGGGCTTGTTCCAGCTCCTTGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTgg                 <  5:337414/149‑1 (MQ=255)                                                                                                                                    ccAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTgg                 <  7:185240/149‑1 (MQ=255)                                                                                                                                     cAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTg                                                                          <  4:96788/91‑1 (MQ=255)                                                                                                                                           ggcggcGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTGGGTCAGGc          >  2:222322/1‑149 (MQ=255)                                                                                                                                            gcggcgCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTgcgcgccgccttcctggccaacatgagccacgaaatccgcaccccgct         <  3:17402‑M2/149‑49 (MQ=255)                                                                                                                                             cggcgCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTgcgcgccgccttcctggccaacatgagccacgaaatccgcaccccgct         <  3:150510‑M2/148‑49 (MQ=255)                                                                                                                                             cggcgCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTGGGTCAGGCgg        >  2:400819/1‑149 (MQ=255)                                                                                                                                              ggcgCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTgcgcgccgccttcctggccaacatgagccacgaaatccgcacaccgctc        <  2:61191‑M2/148‑50 (MQ=255)                                                                                                                                               gcgcgcaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggcgcgcgccgccttcctggccaacatgagccacgaaatccgcaccccgctcaa       >  8:319916‑M1/1‑6 (MQ=255)                                                                                                                                               gcgcgcaccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggcgcgcgccgccttcctggccaacatgagccacgaaatccgcaccccgctcaa       >  5:26727‑M1/1‑6 (MQ=255)                                                                                                                                                  cgcgcCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTGGGTCAGGCGGTTTTc   <  8:122241/149‑1 (MQ=255)                                                                                                                                                    caccaacgagctcaaggccagcaacagcagcctgagcctgtccaaccaggagctggaacaagcccgcagccgagcgctggacatggcccaggcgcgcgccgccttcctggccaacatgagccacgaaatccgcaccccgctcaacggca  >  8:266139‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGATCATGCCGAGCATGCCGTTGAGCGGGGTGCGGATTTCGTGGCTCATGTTGGCCAGGAAGGCGGCGCGCGCCTGGGCCATGTCCAGCGCTCGGCTGCGGGCTTGTTCCAGCTCCTGGT‑TGGACAGGCTCAGGCTGCTGTTGCTGGCCTTGAGCTCGTTGGTGCGCGCCGACACGATGTCTTCCAGCTCGTTCAGGTACTGGGTCAGGCGGTTTTCC  >  NC_002947/2098828‑2099122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.