New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3155823	47 (0.660)	3 (0.040)	3/254	NT	6.3%	coding (440/1104 nt)	PP_2771	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 3155856	44 (0.650)					coding (407/1104 nt)	PP_2771	sigma‑54 dependent transcriptional regulator

CGGGCGTTCTCGCAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAGCCGCCAGGGCGCCGGTG  >  NC_002947/3155675‑3155969                                                                                                                                                     |                                                                                                                                                   cGGGCGTTCTCGCAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCG                                                                                                                                                    <  7:406252‑M1/149‑1 (MQ=255)         ctcGCAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAg                                                                                                                                             <  7:239581/148‑1 (MQ=255)            gCATCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGgcgc                                                                                                                                         <  2:186161/149‑1 (MQ=255)            gCAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGTGCGAGCCCAGgcg                                                                                                                                          >  2:121048/1‑148 (MQ=255)            gCAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGgcg                                                                                                                                          >  2:330410/1‑148 (MQ=255)             cAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGca                                                                                                                                        <  4:150127/149‑1 (MQ=255)                     agagTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGcac                                                                                                                                       >  6:172899/1‑142 (MQ=255)                     agagTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGcac                                                                                                                                       <  5:172899/142‑1 (MQ=255)                      gagTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCAc                                                                                                                               >  2:92362/1‑149 (MQ=255)                       agTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACg                                                                                                                              <  5:318304/149‑1 (MQ=255)                       agTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACg                                                                                                                              <  8:169717/149‑1 (MQ=255)                        gTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGc                                                                                                                             <  8:254972/149‑1 (MQ=255)                        gTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGc                                                                                                                             <  7:141857/149‑1 (MQ=255)                            cAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTcc                                                                                                                          <  4:262558/148‑1 (MQ=255)                             aGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTg                                                                                                                        <  5:337961/149‑1 (MQ=255)                                     cACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCAcgc                                                                                                                >  2:260046‑M2/1‑146 (MQ=255)                                         ttGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGtgctgcaggagcgtgaagtggtgcgcctgggctcgcgcaa                                                                                                            <  8:33290‑M1/149‑41 (MQ=255)                                                 gtagtaCAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGa                                                                                                    >  6:166252/1‑149 (MQ=255)                                                    gtaCAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGAcc                                                                                                  <  1:330410/148‑1 (MQ=255)                                                    gtaCAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCt                                                                                                 >  4:40087/1‑149 (MQ=255)                                                      aCAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTg                                                                                                >  4:308166/1‑148 (MQ=255)                                                       cAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTa                                                                                              >  5:311831/1‑149 (MQ=255)                                                        aGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGCCCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCTAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTAt                                                                                             >  4:280337/1‑149 (MQ=255)                                                               cgcgGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGtgctgcaggagcgtgaagtggtgcgcctgggctcgcgc                                                                                                              <  5:196021‑M1/125‑39 (MQ=255)                                                               cgcgGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGtgctgcaggagcgtgaagtggtgcgcctgggctcgcgc                                                                                                              >  6:196021‑M1/1‑87 (MQ=255)                                                                 cgGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATggg                                                                                    >  6:225197/1‑149 (MQ=255)                                                                               aGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGAttt                                                                      <  2:247715/149‑1 (MQ=255)                                                                                  gATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTtcgt                                                                   >  6:299512/1‑149 (MQ=255)                                                                                       ccTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTtcgtc                                                                  <  2:11215/145‑1 (MQ=255)                                                                                       ccTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTtcgtc                                                                  >  1:11215/1‑145 (MQ=255)                                                                                           gTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGTGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGTACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAAc                                                           <  1:121048/148‑1 (MQ=255)                                                                                            tCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAg                                                         >  5:108783/1‑149 (MQ=255)                                                                                              cAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGc                                                        <  5:299512/148‑1 (MQ=255)                                                                                                 ttGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTcc                                                                                                                          >  5:344623/1‑79 (MQ=255)                                                                                                 ttGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTcc                                                                                                                          <  6:344623/79‑1 (MQ=255)                                                                                                   gCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTgccg                                                  >  6:430501/1‑149 (MQ=255)                                                                                                         tggtggCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCCCCGTTg                                            >  4:353580/1‑149 (MQ=255)                                                                                                          ggtggCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTg                                            <  3:308166/148‑1 (MQ=255)                                                                                                           gtggCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGcc                                          <  1:92362/149‑1 (MQ=255)                                                                                                                   gACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCg                                   >  6:203022/1‑148 (MQ=255)                                                                                                                      cACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGaa                                 >  7:352047/1‑147 (MQ=255)                                                                                                                      cACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGaa                                 <  8:352047/147‑1 (MQ=255)                                                                                                                      cACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAAcc                               >  8:256403/1‑149 (MQ=255)                                                                                                                          cgcACGTCGATGGGGATGCTCTTGCGCGAGCCTAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGcc                           <  3:280337/149‑1 (MQ=255)                                                                                                                          cgcACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGcc                           <  3:353580/149‑1 (MQ=255)                                                                                                                           gcACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCg                          >  1:99698/1‑149 (MQ=255)                                                                                                                           gcACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCg                          <  3:40087/149‑1 (MQ=255)                                                                                                                                 cGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGc                                                                            >  2:90189/1‑93 (MQ=255)                                                                                                                                    tGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAgcc                 <  5:430501/149‑1 (MQ=255)                                                                                                                                    tGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAgcc                 <  6:108783/149‑1 (MQ=255)                                                                                                                                        gATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAgccgc               >  3:223584/1‑147 (MQ=255)                                                                                                                                             tctTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAGCCGCCAGGgcg        >  7:2266/1‑149 (MQ=255)                                                                                                                                               ttGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCAcgcgcaagagcatccccatcgacgtgcgcgtggtcgccgccaccaacgtgcaactggacaaggccatcgctgccggcaacttccgcgaagacctgtactaccgcctcaa      <  8:33290‑M2/149‑110 (MQ=255)                                                                                                                                                 gcgcGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCAcgcgcaagagcatccccatcgacgtgcgcgtggtcgccgccaccaacgtgcaactggacaaggccatcgctgccggcaacttccgcg                            <  5:196021‑M2/125‑88 (MQ=255)                                                                                                                                                 gcgcGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCAcgcgcaagagcatccccatcgacgtgcgcgtggtcgccgccaccaacgtgcaactggacaaggccatcgctgccggcaacttccgcg                            >  6:196021‑M2/1‑38 (MQ=255)                                                                                                                                                  cgcgAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAGCCGCCAGGGCGCCGGt   >  3:269196/1‑149 (MQ=255)                                                                                                                                                  cgcgAGCCCAGGCGCACCACTTCACGCACCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAGCCGCCAGGGCGCCGGt   >  5:359735/1‑149 (MQ=255)                                                                                                                                                   gcgtgctgcaggagcgtgaagtggtgcgcctgggctcgcgcaagagcatccccatcgacgtgcgcgtggtcgccgccaccaacgtgcaactggacaaggccatcgctgccggcaacttccgcgaagacctgtactaccgcctcaacgtg  >  2:260046‑M1/1‑3 (MQ=255)                                                                                                                                                   gcgAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGcc                           >  6:358422/1‑124 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGGGCGTTCTCGCAGCGGATAGAGTTGCAGGCTGACCACGTTGAGGCGGTAGTACAGGTCTTCGCGGAAGTTGCCGGCAGCGATGGCCTTGTCCAGTTGCACGTTGGTGGCGGCGACCACGCGCACGTCGATGGGGATGCTCTTGCGCGAGCCCAGGCGCACCACTTCACGCTCCTGCAGCACGCGCAACAGCTTGACCTGTATGGCCATGGGCAGGTCGCCGATTTCGTCGAGGAACAGCGTGCCGCCGTTGCCCTCCTCGAACCAGCCGGCCTTAGCCGCCAGGGCGCCGGTG  >  NC_002947/3155675‑3155969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.